ID C0BP78_9BACT Unreviewed; 681 AA.
AC C0BP78;
DT 05-MAY-2009, integrated into UniProtKB/TrEMBL.
DT 05-MAY-2009, sequence version 1.
DT 27-MAR-2024, entry version 52.
DE SubName: Full=Transcription factor CarD {ECO:0000313|EMBL:EEG42588.1};
GN ORFNames=Flav3CDRAFT_0237 {ECO:0000313|EMBL:EEG42588.1};
OS Flavobacteria bacterium MS024-3C.
OC Bacteria; Bacteroidota; Flavobacteriia.
OX NCBI_TaxID=487797 {ECO:0000313|EMBL:EEG42588.1, ECO:0000313|Proteomes:UP000003631};
RN [1] {ECO:0000313|EMBL:EEG42588.1, ECO:0000313|Proteomes:UP000003631}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MS024-3C {ECO:0000313|EMBL:EEG42588.1,
RC ECO:0000313|Proteomes:UP000003631};
RG US DOE Joint Genome Institute (JGI-PGF);
RA Woyke T., Xie G., Copeland A., Gonzalez J., Han C., Kiss H., Saw J.,
RA Senin P., Chatterji S., Cheng J.-F., Eisen J.A., Sieracki M.E.,
RA Stepanauskas R.;
RT "Assembling the metagenome, one cell at a time.";
RL Submitted (AUG-2008) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EEG42588.1}.
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DR EMBL; ABVW01000014; EEG42588.1; -; Genomic_DNA.
DR AlphaFoldDB; C0BP78; -.
DR STRING; 487797.Flav3CDRAFT_0237; -.
DR Proteomes; UP000003631; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR Gene3D; 2.40.10.170; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 3.30.2060.10; Penicillin-binding protein 1b domain; 1.
DR InterPro; IPR003711; CarD-like/TRCF_RID.
DR InterPro; IPR036101; CarD-like/TRCF_RID_sf.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR047112; RecG/Mfd.
DR InterPro; IPR041471; UvrB_inter.
DR PANTHER; PTHR47964; ATP-DEPENDENT DNA HELICASE HOMOLOG RECG, CHLOROPLASTIC; 1.
DR PANTHER; PTHR47964:SF1; ATP-DEPENDENT DNA HELICASE HOMOLOG RECG, CHLOROPLASTIC; 1.
DR Pfam; PF02559; CarD_TRCF_RID; 1.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF17757; UvrB_inter; 1.
DR SMART; SM01058; CarD_TRCF; 1.
DR SUPFAM; SSF141259; CarD-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Helicase {ECO:0000256|ARBA:ARBA00022806};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000003631}.
FT DOMAIN 575..657
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
SQ SEQUENCE 681 AA; 77511 MW; AB9D4CF2D0355C34 CRC64;
MSPQLSGLIT EKEGVLPTET KTVYLNGLAG SALSFAITAL FNESKVPFVL ILEDKETAAY
VLNDLESFIG EDRVLFYPAS YKKPYQHSQT DNANILLRAE VLQRFGKKGK PLCIVSYPEA
IFEKVIQKKT LEKNTLNLKQ GELISLDFLN ESLFEYGFKR VDFVSSPGEF SVRGGIVDVF
SYAYDHPYRI EFFGEEVESI RTFDIVSQRS IAKQEEISII PNVTQTDTLT KRQDFFSFTD
KKTTVLIRKP GVLKQKIESL YKEAVLKFDT LEGEIAQIPP ENLYVQSKEL FGALEKHQCV
FLESQPAEIA QLGIQKQQDS AENNILIDFK GTDQPAFNKK FPLIIERLAQ NNLKGTNNYL
FCASEQQAKR FSDIFEAAEK EVPYKTVVLP IHRGFEIPLL HLACYTDHEI FERYHKFHIK
NGFDKKEAIS LSELNKLEIG DYVTHIDHGI GKFGGLQKIA VEGKKQEAIK LSYGERDVLY
VSIHSLHKIA KFNGKDGSPP KIYKLGSGAW KKVKEKTKSR VKKLAFDLIQ IYAKRRLQKG
FQYAADSSLQ HELEASFLYE DTPDQLTATE DIKKDMESER PMDRLICGDV GFGKTEVAIR
AAFKAVDNGK QVAILVPTTI LAYQHFNTLT ARLKDMPVSV DYLNRFRSSK EKKDIFIPAI
RRCGCYVCRV KGIKLQRQSF Y
//
