GenomeNet

Database: UniProt
Entry: C0C1E0_9FIRM
LinkDB: C0C1E0_9FIRM
Original site: C0C1E0_9FIRM 
ID   C0C1E0_9FIRM            Unreviewed;       263 AA.
AC   C0C1E0;
DT   05-MAY-2009, integrated into UniProtKB/TrEMBL.
DT   05-MAY-2009, sequence version 1.
DT   27-MAR-2024, entry version 49.
DE   SubName: Full=Putative RNA methyltransferase, TrmH family, group 3 {ECO:0000313|EMBL:EEG73954.1};
GN   ORFNames=CLOHYLEM_05959 {ECO:0000313|EMBL:EEG73954.1};
OS   [Clostridium] hylemonae DSM 15053.
OC   Bacteria; Bacillota; Clostridia; Eubacteriales; Lachnospiraceae.
OX   NCBI_TaxID=553973 {ECO:0000313|EMBL:EEG73954.1, ECO:0000313|Proteomes:UP000004893};
RN   [1] {ECO:0000313|EMBL:EEG73954.1, ECO:0000313|Proteomes:UP000004893}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 15053 {ECO:0000313|EMBL:EEG73954.1,
RC   ECO:0000313|Proteomes:UP000004893};
RA   Sudarsanam P., Ley R., Guruge J., Turnbaugh P.J., Mahowald M., Liep D.,
RA   Gordon J.;
RT   "Draft genome sequence of Clostridium hylemonae (DSM 15053).";
RL   Submitted (FEB-2009) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:EEG73954.1, ECO:0000313|Proteomes:UP000004893}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 15053 {ECO:0000313|EMBL:EEG73954.1,
RC   ECO:0000313|Proteomes:UP000004893};
RA   Fulton L., Clifton S., Fulton B., Xu J., Minx P., Pepin K.H., Johnson M.,
RA   Bhonagiri V., Nash W.E., Mardis E.R., Wilson R.K.;
RL   Submitted (FEB-2009) to the EMBL/GenBank/DDBJ databases.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:EEG73954.1}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; ABYI02000022; EEG73954.1; -; Genomic_DNA.
DR   RefSeq; WP_006443307.1; NZ_GG657759.1.
DR   AlphaFoldDB; C0C1E0; -.
DR   STRING; 553973.CLOHYLEM_05959; -.
DR   eggNOG; COG0566; Bacteria.
DR   HOGENOM; CLU_021322_3_2_9; -.
DR   OrthoDB; 9785673at2; -.
DR   Proteomes; UP000004893; Unassembled WGS sequence.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProt.
DR   GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR   GO; GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
DR   GO; GO:0032259; P:methylation; IEA:UniProtKB-KW.
DR   GO; GO:0006396; P:RNA processing; IEA:InterPro.
DR   CDD; cd18095; SpoU-like_rRNA-MTase; 1.
DR   Gene3D; 3.30.1330.30; -; 1.
DR   Gene3D; 3.40.1280.10; -; 1.
DR   InterPro; IPR029028; Alpha/beta_knot_MTases.
DR   InterPro; IPR029064; Ribosomal_eL30-like_sf.
DR   InterPro; IPR001537; SpoU_MeTrfase.
DR   InterPro; IPR013123; SpoU_subst-bd.
DR   InterPro; IPR029026; tRNA_m1G_MTases_N.
DR   PANTHER; PTHR43191:SF16; RNA METHYLASE-RELATED; 1.
DR   PANTHER; PTHR43191; RRNA METHYLTRANSFERASE 3; 1.
DR   Pfam; PF00588; SpoU_methylase; 1.
DR   SMART; SM00967; SpoU_sub_bind; 1.
DR   SUPFAM; SSF75217; alpha/beta knot; 1.
DR   SUPFAM; SSF55315; L30e-like; 1.
PE   4: Predicted;
KW   Methyltransferase {ECO:0000313|EMBL:EEG73954.1};
KW   Transferase {ECO:0000313|EMBL:EEG73954.1}.
FT   DOMAIN          30..103
FT                   /note="RNA 2-O ribose methyltransferase substrate binding"
FT                   /evidence="ECO:0000259|SMART:SM00967"
SQ   SEQUENCE   263 AA;  29200 MW;  387F0362F67AFACF CRC64;
     MITSTGNQKV KRLVNLRKKR KARDEEKVFL VEGIRMFREV PAERLLEAYV SESFYKREGG
     TVSRVLEGCA VRPEILSDTV YDYVSDTKTP QGVLCVVRQK EYTFAEAAGG ERAHILVLDN
     LQDPGNMGTV IRTAEGAGVT GIVMSSECVD VYNPKTIRST MGSVYRMPLY RAKDLTEAVR
     RMKESGIHTY AAHLDGVLSY DEADLTKPCA FFIGNEGSGL REEVAALADT YIRIPMEGEV
     ESLNAATAAA VLMFEAARQR RQQ
//
DBGET integrated database retrieval system