ID C0EHB3_9FIRM Unreviewed; 743 AA.
AC C0EHB3;
DT 05-MAY-2009, integrated into UniProtKB/TrEMBL.
DT 05-MAY-2009, sequence version 1.
DT 24-JAN-2024, entry version 42.
DE SubName: Full=Putative stage V sporulation protein D {ECO:0000313|EMBL:EEG29200.1};
GN ORFNames=CLOSTMETH_03313 {ECO:0000313|EMBL:EEG29200.1};
OS [Clostridium] methylpentosum DSM 5476.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Oscillospiraceae;
OC Oscillospiraceae incertae sedis.
OX NCBI_TaxID=537013 {ECO:0000313|EMBL:EEG29200.1, ECO:0000313|Proteomes:UP000003340};
RN [1] {ECO:0000313|EMBL:EEG29200.1, ECO:0000313|Proteomes:UP000003340}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 5476 {ECO:0000313|EMBL:EEG29200.1,
RC ECO:0000313|Proteomes:UP000003340};
RA Fulton L., Clifton S., Fulton B., Xu J., Minx P., Pepin K.H., Johnson M.,
RA Bhonagiri V., Nash W.E., Mardis E.R., Wilson R.K.;
RL Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:EEG29200.1, ECO:0000313|Proteomes:UP000003340}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 5476 {ECO:0000313|EMBL:EEG29200.1,
RC ECO:0000313|Proteomes:UP000003340};
RA Sudarsanam P., Ley R., Guruge J., Turnbaugh P.J., Mahowald M., Liep D.,
RA Gordon J.;
RT "Draft genome sequence of Clostridium methylpentosum (DSM 5476).";
RL Submitted (FEB-2009) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the transpeptidase family.
CC {ECO:0000256|ARBA:ARBA00007171}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EEG29200.1}.
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DR EMBL; ACEC01000115; EEG29200.1; -; Genomic_DNA.
DR AlphaFoldDB; C0EHB3; -.
DR STRING; 537013.CLOSTMETH_03313; -.
DR eggNOG; COG0768; Bacteria.
DR HOGENOM; CLU_009289_6_0_9; -.
DR Proteomes; UP000003340; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0008658; F:penicillin binding; IEA:InterPro.
DR CDD; cd06576; PASTA_Pbp2x-like_1; 1.
DR CDD; cd06577; PASTA_pknB; 1.
DR Gene3D; 3.30.10.20; -; 2.
DR Gene3D; 3.40.710.10; DD-peptidase/beta-lactamase superfamily; 1.
DR Gene3D; 3.90.1310.10; Penicillin-binding protein 2a (Domain 2); 1.
DR InterPro; IPR012338; Beta-lactam/transpept-like.
DR InterPro; IPR005543; PASTA_dom.
DR InterPro; IPR005311; PBP_dimer.
DR InterPro; IPR036138; PBP_dimer_sf.
DR InterPro; IPR001460; PCN-bd_Tpept.
DR PANTHER; PTHR30627; PEPTIDOGLYCAN D,D-TRANSPEPTIDASE; 1.
DR PANTHER; PTHR30627:SF1; PEPTIDOGLYCAN D,D-TRANSPEPTIDASE FTSI; 1.
DR Pfam; PF03793; PASTA; 2.
DR Pfam; PF03717; PBP_dimer; 1.
DR Pfam; PF00905; Transpeptidase; 1.
DR SMART; SM00740; PASTA; 2.
DR SUPFAM; SSF56601; beta-lactamase/transpeptidase-like; 1.
DR SUPFAM; SSF56519; Penicillin binding protein dimerisation domain; 1.
DR SUPFAM; SSF54184; Penicillin-binding protein 2x (pbp-2x), c-terminal domain; 1.
DR PROSITE; PS51178; PASTA; 2.
PE 3: Inferred from homology;
KW Membrane {ECO:0000256|ARBA:ARBA00023136};
KW Reference proteome {ECO:0000313|Proteomes:UP000003340};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989}.
FT DOMAIN 603..669
FT /note="PASTA"
FT /evidence="ECO:0000259|PROSITE:PS51178"
FT DOMAIN 673..738
FT /note="PASTA"
FT /evidence="ECO:0000259|PROSITE:PS51178"
SQ SEQUENCE 743 AA; 80161 MW; EBEC39EC6243D6D8 CRC64;
MAINPTRKMK FKLNIVVLGL LTLVFTILMG RILYISCFAQ VGGVKYGVKA YNQQLGADTI
NANRGTIYDR NMNALARSAT VWTVSVAPNQ IDSDEKREKI ASGLADILGM DKEEILAKTQ
KKNKYEIVKK KVEKPEADKI TEFVKENKLS GVHMVEDSRR YYPLGNTASH VIGFTGSDNQ
GLAGVEIKYN DVLSGTPGKV VISQNALGTN MPFEYEYYYP AQDGNSLVLT LDQTLQHYVD
KALKEAVDTH APGNRTCAIM MDVNNGEIVA MSTQPDFDLN DPFTITDPNL LATLEGKEGD
ELKEAKSTAQ SRMWTNKAIS ETYEPGSVFK VVTSSAALEE KTMTLENTFD CSGSVQVAPG
TTMKCWKAGG HGHESFVDAV VNSCNPAFIK IGASLGPDLF YQYFTQYGMT EKTGIDLPGE
SKSLYVAKKD LGVVSLASES FGQSMSITPM QMLTAFCATV NGGYLVTPHV VKQVIDNDGN
IVQSYDGKVR RQAISEETSE TMRYILEQVV SANGGSNASV PGYRIAGKSG TAQKLARRQE
LGKDVYVSSF AGAVPADNPQ YALLVMVDEP TSGAYYGGAV ASPIFAEIMT DAIPYFGISP
EYTEEELEHL AVSVPYLESF TVEEAKAKLS DAGLAAPEII GSGDTVIRQV PAAGSNVSKD
ASVLLYTDDT DPNASMVTVP DVTNLTQEQA RIRLTNAGLN ISYSNTAVQN TKAMSTSQSP
AAGESVPRGT VVTVEFLTND ETG
//