ID C0H9D3_SALSA Unreviewed; 316 AA.
AC C0H9D3;
DT 05-MAY-2009, integrated into UniProtKB/TrEMBL.
DT 05-MAY-2009, sequence version 1.
DT 27-MAR-2024, entry version 67.
DE SubName: Full=Thyrotrophic embryonic factor {ECO:0000313|RefSeq:NP_001158870.1};
DE SubName: Full=Transcription factor VBP {ECO:0000313|EMBL:ACN10652.1};
GN Name=TEF {ECO:0000313|EMBL:ACN10652.1};
GN Synonyms=tef {ECO:0000313|RefSeq:NP_001158870.1};
OS Salmo salar (Atlantic salmon).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes;
OC Salmonidae; Salmoninae; Salmo.
OX NCBI_TaxID=8030 {ECO:0000313|EMBL:ACN10652.1};
RN [1] {ECO:0000313|EMBL:ACN10652.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Brain {ECO:0000313|EMBL:ACN10652.1};
RG cGRASP (B.F. Koop & W.S. Davidson);
RA Leong J., von Schalburg K., Cooper G., Moore R., Holt R., Davidson W.S.,
RA Koop B.F.;
RL Submitted (FEB-2009) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:ACN10652.1, ECO:0000313|RefSeq:NP_001158870.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Brain {ECO:0000313|EMBL:ACN10652.1};
RX PubMed=20433749; DOI=10.1186/1471-2164-11-279;
RA Leong J.S., Jantzen S.G., von Schalburg K.R., Cooper G.A., Messmer A.M.,
RA Liao N.Y., Munro S., Moore R., Holt R.A., Jones S.J., Davidson W.S.,
RA Koop B.F.;
RT "Salmo salar and Esox lucius full-length cDNA sequences reveal changes in
RT evolutionary pressures on a post-tetraploidization genome.";
RL BMC Genomics 11:279-279(2010).
RN [3] {ECO:0000313|EMBL:ACN10652.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Brain {ECO:0000313|EMBL:ACN10652.1};
RG cGRASP (B.F. Koop & W.S. Davidson);
RL Submitted (AUG-2010) to the EMBL/GenBank/DDBJ databases.
RN [4] {ECO:0000313|RefSeq:NP_001158870.1}
RP IDENTIFICATION.
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the bZIP family. PAR subfamily.
CC {ECO:0000256|ARBA:ARBA00009208}.
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DR EMBL; BT058939; ACN10652.1; -; mRNA.
DR RefSeq; NP_001158870.1; NM_001165398.1.
DR STRING; 8030.ENSSSAP00000004499; -.
DR PaxDb; 8030-ENSSSAP00000004499; -.
DR Ensembl; ENSSSAT00000004814; ENSSSAP00000004499; ENSSSAG00000002242.
DR GeneID; 100306859; -.
DR KEGG; sasa:100306859; -.
DR CTD; 7008; -.
DR OMA; NDSDITC; -.
DR OrthoDB; 5354784at2759; -.
DR Proteomes; UP000087266; Chromosome ssa01.
DR Bgee; ENSSSAG00000002242; Expressed in brain and 15 other cell types or tissues.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IEA:InterPro.
DR CDD; cd14695; bZIP_HLF; 1.
DR Gene3D; 1.20.5.170; -; 1.
DR InterPro; IPR004827; bZIP.
DR InterPro; IPR046347; bZIP_sf.
DR InterPro; IPR040223; PAR_bZIP.
DR PANTHER; PTHR11988:SF24; THYROTROPH EMBRYONIC FACTOR; 1.
DR PANTHER; PTHR11988; THYROTROPH EMBRYONIC FACTOR RELATED; 1.
DR Pfam; PF07716; bZIP_2; 1.
DR SMART; SM00338; BRLZ; 1.
DR SUPFAM; SSF57959; Leucine zipper domain; 1.
DR PROSITE; PS50217; BZIP; 1.
PE 2: Evidence at transcript level;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000087266}.
FT DOMAIN 240..303
FT /note="BZIP"
FT /evidence="ECO:0000259|PROSITE:PS50217"
SQ SEQUENCE 316 AA; 35235 MW; 21BD18043FE31BA1 CRC64;
MSGEPITTTL ETFMGSPGAF PVVLKKIMEM PPPNLLEDDD DNDKEKLLMG DNVDLEGGSG
MGPSAALTPA IWDKTIPYNG ETFHLEYMDL EEFLMENGIS TSPSSLDDAL NVENAGKTEM
PTTMAAKPKR APAAPISLLP ILELDQCEEE GVTITLNSVD IADDTEVVTD KDRLTPEPTD
PEEIEVDVNF DPDPTDLVLS SVPGGELFNP RKHKFSEEEL KPQPMIKKAK KVYVPEDSKD
EKYWQRRKKN NVAAKRSRDA RRLKENQITV RAAFLERENT ALRQEVGELR KDFARSKNVV
ARYAAKFGEL APLEDK
//
