ID C0P938_MAIZE Unreviewed; 577 AA.
AC C0P938;
DT 05-MAY-2009, integrated into UniProtKB/TrEMBL.
DT 05-MAY-2009, sequence version 1.
DT 27-MAR-2024, entry version 74.
DE SubName: Full=Retrovirus-related Pol polyprotein LINE-1 {ECO:0000313|EMBL:ONM20457.1};
GN Name=100382576 {ECO:0000313|EnsemblPlants:Zm00001eb094690_P001};
GN ORFNames=ZEAMMB73_Zm00001d005156 {ECO:0000313|EMBL:ONM20457.1};
OS Zea mays (Maize).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea.
OX NCBI_TaxID=4577 {ECO:0000313|EMBL:ACN30683.1};
RN [1] {ECO:0000313|EMBL:ACN30683.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=B73 {ECO:0000313|EMBL:ACN30683.1};
RX PubMed=19936069; DOI=10.1371/journal.pgen.1000740;
RA Soderlund C., Descour A., Kudrna D., Bomhoff M., Boyd L., Currie J.,
RA Angelova A., Collura K., Wissotski M., Ashley E., Morrow D., Fernandes J.,
RA Walbot V., Yu Y.;
RT "Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs.";
RL PLoS Genet. 5:E1000740-E1000740(2009).
RN [2] {ECO:0000313|EMBL:ONM20457.1, ECO:0000313|Proteomes:UP000007305}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. B73 {ECO:0000313|EnsemblPlants:Zm00001eb094690_P001,
RC ECO:0000313|Proteomes:UP000007305};
RC TISSUE=Seedling {ECO:0000313|EMBL:ONM20457.1};
RG Maize Genome Sequencing Project;
RA Ware D.;
RT "Update maize B73 reference genome by single molecule sequencing
RT technologies.";
RL Submitted (DEC-2015) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EnsemblPlants:Zm00001eb094690_P001}
RP IDENTIFICATION.
RC STRAIN=cv. B73 {ECO:0000313|EnsemblPlants:Zm00001eb094690_P001};
RG EnsemblPlants;
RL Submitted (MAY-2021) to UniProtKB.
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DR EMBL; BT064807; ACN30683.1; -; mRNA.
DR EMBL; CM007648; ONM20457.1; -; Genomic_DNA.
DR RefSeq; NP_001168778.1; NM_001175307.1.
DR AlphaFoldDB; C0P938; -.
DR EnsemblPlants; Zm00001eb094690_T001; Zm00001eb094690_P001; Zm00001eb094690.
DR Gramene; Zm00001eb094690_T001; Zm00001eb094690_P001; Zm00001eb094690.
DR OrthoDB; 925736at2759; -.
DR Proteomes; UP000007305; Chromosome 2.
DR ExpressionAtlas; C0P938; baseline and differential.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR Gene3D; 4.10.1060.10; Zinc finger, RanBP2-type; 2.
DR InterPro; IPR001876; Znf_RanBP2.
DR InterPro; IPR036443; Znf_RanBP2_sf.
DR PANTHER; PTHR23111:SF29; OS07G0404300 PROTEIN; 1.
DR PANTHER; PTHR23111; ZINC FINGER PROTEIN; 1.
DR Pfam; PF00641; zf-RanBP; 2.
DR SMART; SM00547; ZnF_RBZ; 2.
DR SUPFAM; SSF90209; Ran binding protein zinc finger-like; 2.
DR PROSITE; PS01358; ZF_RANBP2_1; 2.
DR PROSITE; PS50199; ZF_RANBP2_2; 2.
PE 1: Evidence at protein level;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Proteomics identification {ECO:0007829|PeptideAtlas:C0P938};
KW Reference proteome {ECO:0000313|Proteomes:UP000007305};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00322};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00322}.
FT DOMAIN 113..142
FT /note="RanBP2-type"
FT /evidence="ECO:0000259|PROSITE:PS50199"
FT DOMAIN 146..175
FT /note="RanBP2-type"
FT /evidence="ECO:0000259|PROSITE:PS50199"
FT REGION 87..109
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 230..577
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 306..326
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 327..379
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 380..399
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 423..439
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 472..539
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 559..577
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 577 AA; 66242 MW; DD212B24F79A892A CRC64;
MDYVCSSCNL RNECTRGYIL TRKEDEVRTL DVMRILLIYG FDHVKETVEN KPLLKLKSLK
NVVRKLIHEI VKLSAVPIDP NLPPPVIKKP PIKVKQPPPP PKKRVGRDDV EMKKGDWLCP
KCDFMNFAKN TVCLQCDAKR PKRQLLPGEW ECPRCNFLNY RRNMSCFHCE HDRPSDEYAN
RQMEAKQSAL RNRLERPPRK SDISSAWNFD FEDNESDGAD VAAFEYADSS KVRRESSSAG
SMSYRGVSKG SDDEEYRMAE TMTTGRGNKF SERDSLPSSR DGFNDFDDED DDIDSYELDL
SKGSHTGGVS RMSYSDLESA SDSEGFSEID NSRESRYGNS KESRYDNGRE SRNDNNRESK
YAAKVEDEFE DHHSLRSTHL ADSWQKTRGR SGSNDYRRAS FGSESDDEIN SYPDEDIDKG
PRNNGSRSQG STNRASVRHN ALAYSDDEPF SDDVDSGMAD RFGPRQTKSS TNIKDNFRDT
RRNLNGRRSS GDRYGRTERN ERDRYGRTEQ RNERDRYGRT ERNERFNNFD MHRGGSVLDK
GRGARGNQLD SGSRGLQRNA RRNWDRSGGF DGRHKGV
//
