ID C0PGU8_MAIZE Unreviewed; 753 AA.
AC C0PGU8; A0A3L6F366;
DT 05-MAY-2009, integrated into UniProtKB/TrEMBL.
DT 05-MAY-2009, sequence version 1.
DT 24-JAN-2024, entry version 91.
DE RecName: Full=glycerophosphodiester phosphodiesterase {ECO:0000256|ARBA:ARBA00012247};
DE EC=3.1.4.46 {ECO:0000256|ARBA:ARBA00012247};
GN ORFNames=ZEAMMB73_Zm00001d050917 {ECO:0000313|EMBL:AQK53237.1};
OS Zea mays (Maize).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea.
OX NCBI_TaxID=4577 {ECO:0000313|EMBL:ACN34414.1};
RN [1] {ECO:0000313|EMBL:ACN34414.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=B73 {ECO:0000313|EMBL:ACN34414.1};
RX PubMed=19936069; DOI=10.1371/journal.pgen.1000740;
RA Soderlund C., Descour A., Kudrna D., Bomhoff M., Boyd L., Currie J.,
RA Angelova A., Collura K., Wissotski M., Ashley E., Morrow D., Fernandes J.,
RA Walbot V., Yu Y.;
RT "Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs.";
RL PLoS Genet. 5:E1000740-E1000740(2009).
RN [2] {ECO:0000313|EMBL:AQK53237.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Seedling {ECO:0000313|EMBL:AQK53237.1};
RG Maize Genome Sequencing Project;
RA Ware D.;
RT "Update maize B73 reference genome by single molecule sequencing
RT technologies.";
RL Submitted (DEC-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a sn-glycero-3-phosphodiester + H2O = an alcohol + H(+) + sn-
CC glycerol 3-phosphate; Xref=Rhea:RHEA:12969, ChEBI:CHEBI:15377,
CC ChEBI:CHEBI:15378, ChEBI:CHEBI:30879, ChEBI:CHEBI:57597,
CC ChEBI:CHEBI:83408; EC=3.1.4.46;
CC Evidence={ECO:0000256|ARBA:ARBA00029315};
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DR EMBL; BT067517; ACN34414.1; -; mRNA.
DR EMBL; BT067607; ACN34504.1; -; mRNA.
DR EMBL; CM000780; AQK53237.1; -; Genomic_DNA.
DR RefSeq; NP_001169682.1; NM_001176211.1.
DR AlphaFoldDB; C0PGU8; -.
DR SMR; C0PGU8; -.
DR IntAct; C0PGU8; 1.
DR STRING; 4577.C0PGU8; -.
DR PaxDb; 4577-GRMZM2G018416_P01; -.
DR GeneID; 100383563; -.
DR KEGG; zma:100383563; -.
DR eggNOG; KOG2258; Eukaryota.
DR HOGENOM; CLU_010414_0_0_1; -.
DR InParanoid; C0PGU8; -.
DR OMA; YKLNSCM; -.
DR OrthoDB; 1200549at2759; -.
DR ExpressionAtlas; C0PGU8; baseline and differential.
DR GO; GO:0008889; F:glycerophosphodiester phosphodiesterase activity; IBA:GO_Central.
DR GO; GO:0006071; P:glycerol metabolic process; IEA:UniProtKB-KW.
DR GO; GO:0006629; P:lipid metabolic process; IEA:InterPro.
DR CDD; cd08603; GDPD_SHV3_repeat_1; 1.
DR CDD; cd08604; GDPD_SHV3_repeat_2; 1.
DR Gene3D; 3.20.20.190; Phosphatidylinositol (PI) phosphodiesterase; 2.
DR InterPro; IPR030395; GP_PDE_dom.
DR InterPro; IPR017946; PLC-like_Pdiesterase_TIM-brl.
DR PANTHER; PTHR43620:SF40; GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE; 1.
DR PANTHER; PTHR43620; GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE; 1.
DR Pfam; PF03009; GDPD; 1.
DR SUPFAM; SSF51695; PLC-like phosphodiesterases; 2.
DR PROSITE; PS51704; GP_PDE; 2.
PE 2: Evidence at transcript level;
KW Glycerol metabolism {ECO:0000256|ARBA:ARBA00022798};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Signal {ECO:0000256|ARBA:ARBA00022729, ECO:0000256|SAM:SignalP}.
FT SIGNAL 1..32
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 33..753
FT /note="glycerophosphodiester phosphodiesterase"
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5010827666"
FT DOMAIN 46..345
FT /note="GP-PDE"
FT /evidence="ECO:0000259|PROSITE:PS51704"
FT DOMAIN 361..663
FT /note="GP-PDE"
FT /evidence="ECO:0000259|PROSITE:PS51704"
SQ SEQUENCE 753 AA; 81684 MW; 1A7BE4D9A7E62D0F CRC64;
MPAMGRSSRA CSLLGSTHLL LLLLLSVGSA VAQNGSTWKT LSGKAPAVVA KGGFSGLFPD
SSDYAYQFVG ISSSPDTTVW CDVRLTKDGA GICLPSINMD NCTIIASVFP QGKKTYKVNG
VSTAGWFSVD YTSTVLLQNV SLKQSVLSRT PAYDGLFQIN PVENIFTLYK APAVWLNVQH
DSFYSQFKLS MRSYILSLSK QFIVDYISSP EVNFLTSISG RVSKKTKLVF RFLDERSIEP
STNQTYGSML KNLTFVKTFA SGILVPKSYI WPVTPDNYLL PYTSVVDDAH KAGLEIYAAD
FANDLTISYN YSFDPLAEYL FFIDNGAFSV DGVLTDFPIT PSEAVGCFSN LNTSKIDHAK
PLVISHNGAS GDYPDCTDQA YEKAVADGAD VIDCPVQVTK DGILICMSSV DLMDVTTVAK
SQFASQVTTI NSLKAGSGVF TFNLTWDDIS KNLKPMISNP MSTYNLYRNP RNKNAGNFMR
LSDFLTFANG KDLSGIMITV EHAAFMAEEL GFGVVDAVIK ALDDSGYSKQ TAQNVMIQST
NSSVLVKFKQ ETKYNLVYMI EESVRDAAPS SLADIKKFAD AVSVGTTSVF PETHYYLTNQ
TNKLVPTLKS AGLQVYVYVL MNEFASQPND FFADATSQIN AYVQSAKVDG VITDFPGTAH
RYKLNSCTSM GKNMPLFMQP PQPGGLLSTI LPDAQPPAAA PMPLLTDADV AEPALPPVSN
TTTAASPSHA ALRMRTHVLS IATLLMLCAS LLI
//