ID C1D2B7_DEIDV Unreviewed; 512 AA.
AC C1D2B7;
DT 26-MAY-2009, integrated into UniProtKB/TrEMBL.
DT 26-MAY-2009, sequence version 1.
DT 27-MAR-2024, entry version 61.
DE SubName: Full=Putative dipeptide ABC transporter, periplasmic component {ECO:0000313|EMBL:ACO47556.1};
GN OrderedLocusNames=Deide_1p01230 {ECO:0000313|EMBL:ACO47556.1};
OS Deinococcus deserti (strain DSM 17065 / CIP 109153 / LMG 22923 / VCD115).
OG Plasmid pDeide1 {ECO:0000313|Proteomes:UP000002208}.
OC Bacteria; Deinococcota; Deinococci; Deinococcales; Deinococcaceae;
OC Deinococcus.
OX NCBI_TaxID=546414 {ECO:0000313|EMBL:ACO47556.1, ECO:0000313|Proteomes:UP000002208};
RN [1] {ECO:0000313|EMBL:ACO47556.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=1 {ECO:0000313|EMBL:ACO47556.1}, and VCD115
RC {ECO:0000313|EMBL:ACO47556.1};
RC PLASMID=1 {ECO:0000313|EMBL:ACO47556.1};
RX PubMed=19370165; DOI=10.1371/journal.pgen.1000434;
RA de Groot A., Dulermo R., Ortet P., Blanchard L., Guerin P., Fernandez B.,
RA Vacherie B., Dossat C., Jolivet E., Siguier P., Chandler M., Barakat M.,
RA Dedieu A., Barbe V., Heulin T., Sommer S., Achouak W., Armengaud J.;
RT "Alliance of proteomics and genomics to unravel the specificities of Sahara
RT bacterium Deinococcus deserti.";
RL PLoS Genet. 5:E1000434-E1000434(2009).
RN [2] {ECO:0000313|EMBL:ACO47556.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=VCD115 {ECO:0000313|EMBL:ACO47556.1};
RC PLASMID=1 {ECO:0000313|EMBL:ACO47556.1};
RX PubMed=19875382; DOI=10.1074/mcp.M900359-MCP200;
RA Baudet M., Ortet P., Gaillard J.C., Fernandez B., Guerin P., Enjalbal C.,
RA Subra G., de Groot A., Barakat M., Dedieu A., Armengaud J.;
RT "Proteomics-based refinement of Deinococcus deserti genome annotation
RT reveals an unwonted use of non-canonical translation initiation codons.";
RL Mol. Cell. Proteomics 9:415-426(2010).
RN [3] {ECO:0000313|EMBL:ACO47556.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=VCD115 {ECO:0000313|EMBL:ACO47556.1};
RC PLASMID=1 {ECO:0000313|EMBL:ACO47556.1};
RA De Groot A., Dulermo R., Ortet P., Blanchard L., Guerin P., Fernandez B.,
RA Vacherie B., Dossat C., Jolivet E., Siguier P., Chandler M., Barakat M.,
RA Dedieu A., Barbe V., Heulin T., Sommer S., Achouak W., Jean A.;
RL Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases.
RN [4] {ECO:0000313|EMBL:ACO47556.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=VCD115; PLASMID=1;
RX PubMed=24723731; DOI=10.1093/gbe/evu069;
RA de Groot A., Roche D., Fernandez B., Ludanyi M., Cruveiller S., Pignol D.,
RA Vallenet D., Armengaud J., Blanchard L.;
RT "RNA Sequencing and Proteogenomics Reveal the Importance of Leaderless
RT mRNAs in the Radiation-Tolerant Bacterium Deinococcus deserti.";
RL Genome Biol. Evol. 6:932-948(2014).
CC -!- SIMILARITY: Belongs to the bacterial solute-binding protein 5 family.
CC {ECO:0000256|ARBA:ARBA00005695}.
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DR EMBL; CP001115; ACO47556.1; -; Genomic_DNA.
DR RefSeq; WP_012694679.1; NC_012527.1.
DR AlphaFoldDB; C1D2B7; -.
DR KEGG; ddr:Deide_1p01230; -.
DR HOGENOM; CLU_017028_8_6_0; -.
DR OrthoDB; 137511at2; -.
DR Proteomes; UP000002208; Plasmid pDeide1.
DR GO; GO:0043190; C:ATP-binding cassette (ABC) transporter complex; IEA:InterPro.
DR GO; GO:0042597; C:periplasmic space; IEA:UniProt.
DR GO; GO:0055085; P:transmembrane transport; IEA:InterPro.
DR Gene3D; 3.40.190.10; Periplasmic binding protein-like II; 1.
DR InterPro; IPR030678; Peptide/Ni-bd.
DR InterPro; IPR039424; SBP_5.
DR InterPro; IPR000914; SBP_5_dom.
DR PANTHER; PTHR30290:SF88; OLIGOPEPTIDE-BINDING PROTEIN APPA; 1.
DR PANTHER; PTHR30290; PERIPLASMIC BINDING COMPONENT OF ABC TRANSPORTER; 1.
DR Pfam; PF00496; SBP_bac_5; 1.
DR PIRSF; PIRSF002741; MppA; 1.
DR SUPFAM; SSF53850; Periplasmic binding protein-like II; 1.
PE 3: Inferred from homology;
KW Plasmid {ECO:0000313|EMBL:ACO47556.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000002208}.
FT DOMAIN 63..432
FT /note="Solute-binding protein family 5"
FT /evidence="ECO:0000259|Pfam:PF00496"
SQ SEQUENCE 512 AA; 56746 MW; 90918C0F43C19640 CRC64;
MNRTLMALGF ALVCGVAGAQ ANILQLPLIN DPIMNPLIAP DLGSILVNKV IFPGLVRPDE
NLQPVPDLAK SWTITNGGLV YTFVLRDDVR WHDGKPFTAQ DVVYTFKTAI DPKSGSRLAS
DFNSIKSVEA RGNHTVRFVL SRPFAPFLIL LGHNAGILPK HLLEGKDLSS NTAFNRQLPI
GTGPFKVSRV VPGASVTLVA NKDYYRGDPK LAGITFKIVP DLNTQVAQLR SGQLDWATLE
PSNLASVQNV PNIAIKEANA IQHFLVFFNL KNPLFTAPKV REAMQYAVNR KAIIDGILKG
YADYPTGTIP TALRTYYDKS IKPIAYNPAQ ALKLLAQAGW KPNARGTLVN SKGEPFKFTL
IVDKGNATRE QAALAVQQDL KKIGMDVTLQ TLEFGTLVRD YLIPGKYDAN LIWWTTPPDP
DQYSFYATGQ DNNEASWSNA RADSLLKRGR ETVDPKARKN IYNAYQRLTM QDPPVLVLYY
PKEIQAINKD LTGVPDLGIR DALRYTERFQ LR
//
