ID C1DBU5_LARHH Unreviewed; 218 AA.
AC C1DBU5;
DT 26-MAY-2009, integrated into UniProtKB/TrEMBL.
DT 26-MAY-2009, sequence version 1.
DT 27-MAR-2024, entry version 56.
DE SubName: Full=ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:ACO75498.1};
GN OrderedLocusNames=LHK_02516 {ECO:0000313|EMBL:ACO75498.1};
OS Laribacter hongkongensis (strain HLHK9).
OC Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
OC Aquaspirillaceae; Laribacter.
OX NCBI_TaxID=557598 {ECO:0000313|EMBL:ACO75498.1, ECO:0000313|Proteomes:UP000002010};
RN [1] {ECO:0000313|EMBL:ACO75498.1, ECO:0000313|Proteomes:UP000002010}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=HLHK9 {ECO:0000313|EMBL:ACO75498.1,
RC ECO:0000313|Proteomes:UP000002010};
RX PubMed=19283063; DOI=10.1371/journal.pgen.1000416;
RA Woo P.C., Lau S.K., Tse H., Teng J.L., Curreem S.O., Tsang A.K., Fan R.Y.,
RA Wong G.K., Huang Y., Loman N.J., Snyder L.A., Cai J.J., Huang J.D., Mak W.,
RA Pallen M.J., Lok S., Yuen K.Y.;
RT "The complete genome and proteome of Laribacter hongkongensis reveal
RT potential mechanisms for adaptations to different temperatures and
RT habitats.";
RL PLoS Genet. 5:E1000416-E1000416(2009).
CC -!- PATHWAY: Cell wall biogenesis; peptidoglycan biosynthesis.
CC {ECO:0000256|ARBA:ARBA00004752}.
CC -!- SIMILARITY: Belongs to the YkuD family.
CC {ECO:0000256|ARBA:ARBA00005992}.
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DR EMBL; CP001154; ACO75498.1; -; Genomic_DNA.
DR RefSeq; WP_012697984.1; NC_012559.1.
DR AlphaFoldDB; C1DBU5; -.
DR STRING; 557598.LHK_02516; -.
DR KEGG; lhk:LHK_02516; -.
DR eggNOG; COG1376; Bacteria.
DR HOGENOM; CLU_042399_3_0_4; -.
DR UniPathway; UPA00219; -.
DR Proteomes; UP000002010; Chromosome.
DR GO; GO:0004180; F:carboxypeptidase activity; IEA:UniProt.
DR GO; GO:0016740; F:transferase activity; IEA:UniProtKB-KW.
DR GO; GO:0009252; P:peptidoglycan biosynthetic process; IEA:UniProtKB-UniPathway.
DR CDD; cd16913; YkuD_like; 1.
DR Gene3D; 2.40.440.10; L,D-transpeptidase catalytic domain-like; 1.
DR InterPro; IPR005490; LD_TPept_cat_dom.
DR InterPro; IPR038063; Transpep_catalytic_dom.
DR PANTHER; PTHR30582; L,D-TRANSPEPTIDASE; 1.
DR PANTHER; PTHR30582:SF24; L,D-TRANSPEPTIDASE ERFK_SRFK-RELATED; 1.
DR Pfam; PF03734; YkuD; 1.
DR SUPFAM; SSF141523; L,D-transpeptidase catalytic domain-like; 1.
PE 3: Inferred from homology;
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Reference proteome {ECO:0000313|Proteomes:UP000002010};
KW Signal {ECO:0000256|SAM:SignalP};
KW Transferase {ECO:0000256|ARBA:ARBA00022679}.
FT SIGNAL 1..19
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 20..218
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5002908564"
FT DOMAIN 53..214
FT /note="L,D-transpeptidase catalytic"
FT /evidence="ECO:0000259|Pfam:PF03734"
SQ SEQUENCE 218 AA; 23662 MW; E56E557C254C65FE CRC64;
MMKLLTLLWA CLLAAPALAS SSPAPSRLAG FVLDQQSSSL LPGQTNPRHP GEPWIRVGVG
SQTLTLFDGD GTPRRHWVIS TAKNGVGEQF GSYQTPRGWH TVCDKIGADA APDAIFYRRQ
DTGWRYSAEL ARENPDKDWI LTRILWLCGA EPGFNQGELP DGTLVDSYQR GIYIHGGGAH
VPFGTPTSKG CVRMTTPSVI DLFELVPTGT DVWIDVAG
//
