ID C1FDQ7_MICCC Unreviewed; 597 AA.
AC C1FDQ7;
DT 26-MAY-2009, integrated into UniProtKB/TrEMBL.
DT 26-MAY-2009, sequence version 1.
DT 27-MAR-2024, entry version 69.
DE RecName: Full=BOP1 N-terminal domain-containing protein {ECO:0000259|SMART:SM01035};
GN Name=BOP1 {ECO:0000313|EMBL:ACO68826.1};
GN ORFNames=MICPUN_107319 {ECO:0000313|EMBL:ACO68826.1};
OS Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) (Picoplanktonic
OS green alga).
OC Eukaryota; Viridiplantae; Chlorophyta; Mamiellophyceae; Mamiellales;
OC Mamiellaceae; Micromonas.
OX NCBI_TaxID=296587 {ECO:0000313|EMBL:ACO68826.1, ECO:0000313|Proteomes:UP000002009};
RN [1] {ECO:0000313|EMBL:ACO68826.1, ECO:0000313|Proteomes:UP000002009}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=RCC299 / NOUM17 {ECO:0000313|Proteomes:UP000002009};
RX PubMed=19359590; DOI=10.1126/science.1167222;
RA Worden A.Z., Lee J.H., Mock T., Rouze P., Simmons M.P., Aerts A.L.,
RA Allen A.E., Cuvelier M.L., Derelle E., Everett M.V., Foulon E.,
RA Grimwood J., Gundlach H., Henrissat B., Napoli C., McDonald S.M.,
RA Parker M.S., Rombauts S., Salamov A., Von Dassow P., Badger J.H.,
RA Coutinho P.M., Demir E., Dubchak I., Gentemann C., Eikrem W., Gready J.E.,
RA John U., Lanier W., Lindquist E.A., Lucas S., Mayer K.F., Moreau H.,
RA Not F., Otillar R., Panaud O., Pangilinan J., Paulsen I., Piegu B.,
RA Poliakov A., Robbens S., Schmutz J., Toulza E., Wyss T., Zelensky A.,
RA Zhou K., Armbrust E.V., Bhattacharya D., Goodenough U.W., Van de Peer Y.,
RA Grigoriev I.V.;
RT "Green evolution and dynamic adaptations revealed by genomes of the marine
RT picoeukaryotes Micromonas.";
RL Science 324:268-272(2009).
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleolus
CC {ECO:0000256|ARBA:ARBA00004604}.
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DR EMBL; CP001574; ACO68826.1; -; Genomic_DNA.
DR RefSeq; XP_002507568.1; XM_002507522.1.
DR AlphaFoldDB; C1FDQ7; -.
DR STRING; 296587.C1FDQ7; -.
DR GeneID; 8250103; -.
DR KEGG; mis:MICPUN_107319; -.
DR eggNOG; KOG0650; Eukaryota.
DR InParanoid; C1FDQ7; -.
DR OMA; MRPAKGE; -.
DR OrthoDB; 5472008at2759; -.
DR Proteomes; UP000002009; Chromosome 1.
DR GO; GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
DR GO; GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 1.
DR InterPro; IPR028598; BOP1/Erb1.
DR InterPro; IPR012953; BOP1_N_dom.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR PANTHER; PTHR17605:SF0; RIBOSOME BIOGENESIS PROTEIN BOP1; 1.
DR PANTHER; PTHR17605; RIBOSOME BIOGENESIS PROTEIN BOP1 BLOCK OF PROLIFERATION 1 PROTEIN; 1.
DR Pfam; PF08145; BOP1NT; 1.
DR Pfam; PF00400; WD40; 3.
DR SMART; SM01035; BOP1NT; 1.
DR SMART; SM00320; WD40; 6.
DR SUPFAM; SSF50978; WD40 repeat-like; 1.
DR PROSITE; PS50082; WD_REPEATS_2; 1.
DR PROSITE; PS50294; WD_REPEATS_REGION; 1.
PE 4: Predicted;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000002009};
KW Ribosome biogenesis {ECO:0000256|ARBA:ARBA00022517};
KW rRNA processing {ECO:0000256|ARBA:ARBA00022552};
KW WD repeat {ECO:0000256|PROSITE-ProRule:PRU00221}.
FT DOMAIN 13..262
FT /note="BOP1 N-terminal"
FT /evidence="ECO:0000259|SMART:SM01035"
FT REPEAT 269..310
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REGION 153..178
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 153..168
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 597 AA; 68080 MW; 25A14B577F61B223 CRC64;
MENTTGDAPS EWYREEEHIG YDVDGRRISK RRWNDSIENL LHTIDDPSYW RKVFDEKEDR
EISLSRAHVE LIQRLRSGAF PKSSSSSDLK HEQNHGIAEV AWQINHEPKR RFIPSKWEAK
LVLRIVRALR AHATPNALQS NTVEQKMIWE AEDASQRSTR DHTYLPAQKP KKPNHADSYN
PPFEYQINDE DAPGTNGHDN HATRTLFNAL RRVPSYSEFV VERFQRCLDL YLCPRVKKHR
LHVRPQDILP PLPSPKDLKP FPSSNCLKFT GHEDKVLSIA IDHSGQWLLS ASEDCSIRKW
EISSSRCISV WRFRDIVKSV AWCPSPMANT FSACVASDIV LLKSTRASGS VPLLSSHHSV
HSKVENSKLP EWKERDGEMI VHLASDVSKV TWHKKGDYFA SFMIGGNNVM IHRMSRRTSQ
LIFRDQKFPI QSVMFHPYRP FMLICTRTCV YLYDLNKQSL IKKLSSGNQT LSCMAVHPGG
DNLIIGTDLG RLAWFDLDLA TSPYKVMATH ASAVKGVAFH AKLPLFASVS DDATTQVFHG
MVHAELDQNT LIVPLKILRY TSESNCDGVF DCVFHPTQPW LFTAGADRSI LLVCDDN
//
