ID C3KMR8_SINFN Unreviewed; 340 AA.
AC C3KMR8;
DT 16-JUN-2009, integrated into UniProtKB/TrEMBL.
DT 16-JUN-2009, sequence version 1.
DT 27-MAR-2024, entry version 104.
DE SubName: Full=Transcriptional regulator, LacI family {ECO:0000313|EMBL:ACP23683.1};
GN OrderedLocusNames=NGR_b22380 {ECO:0000313|EMBL:ACP23683.1};
OS Sinorhizobium fredii (strain NBRC 101917 / NGR234).
OG Plasmid sym pNGR234b {ECO:0000313|Proteomes:UP000001054}.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
OC Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.
OX NCBI_TaxID=394 {ECO:0000313|EMBL:ACP23683.1, ECO:0000313|Proteomes:UP000001054};
RN [1] {ECO:0000313|Proteomes:UP000001054}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NBRC 101917 / NGR234 {ECO:0000313|Proteomes:UP000001054};
RX PubMed=14702322; DOI=10.1128/JB.186.2.535-542.2004;
RA Streit W.R., Schmitz R.A., Perret X., Staehelin C., Deakin W.J., Raasch C.,
RA Liesegang H., Broughton W.J.;
RT "An evolutionary hot spot: the pNGR234b replicon of Rhizobium sp. strain
RT NGR234.";
RL J. Bacteriol. 186:535-542(2004).
RN [2] {ECO:0000313|EMBL:ACP23683.1, ECO:0000313|Proteomes:UP000001054}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NBRC 101917 / NGR234 {ECO:0000313|Proteomes:UP000001054};
RX PubMed=19376903; DOI=10.1128/AEM.00515-09;
RA Schmeisser C., Liesegang H., Krysciak D., Bakkou N., Le Quere A.,
RA Wollherr A., Heinemeyer I., Morgenstern B., Pommerening-Roeser A.,
RA Flores M., Palacios R., Brenner S., Gottschalk G., Schmitz R.A.,
RA Broughton W.J., Perret X., Strittmatter A.W., Streit W.R.;
RT "Rhizobium sp. strain NGR234 possesses a remarkable number of secretion
RT systems.";
RL Appl. Environ. Microbiol. 75:4035-4045(2009).
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DR EMBL; CP000874; ACP23683.1; -; Genomic_DNA.
DR RefSeq; WP_015888299.1; NC_012586.1.
DR RefSeq; YP_002824436.1; NC_012586.1.
DR AlphaFoldDB; C3KMR8; -.
DR KEGG; rhi:NGR_b22380; -.
DR PATRIC; fig|394.7.peg.2665; -.
DR HOGENOM; CLU_037628_6_3_5; -.
DR OrthoDB; 7170131at2; -.
DR Proteomes; UP000001054; Plasmid sym pNGR234b.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd01392; HTH_LacI; 1.
DR CDD; cd01575; PBP1_GntR; 1.
DR Gene3D; 3.40.50.2300; -; 2.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR InterPro; IPR001387; Cro/C1-type_HTH.
DR InterPro; IPR000843; HTH_LacI.
DR InterPro; IPR046335; LacI/GalR-like_sensor.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR InterPro; IPR028082; Peripla_BP_I.
DR PANTHER; PTHR30146; LACI-RELATED TRANSCRIPTIONAL REPRESSOR; 1.
DR PANTHER; PTHR30146:SF33; TRANSCRIPTIONAL REGULATOR-RELATED; 1.
DR Pfam; PF00356; LacI; 1.
DR Pfam; PF13377; Peripla_BP_3; 1.
DR SMART; SM00354; HTH_LACI; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR SUPFAM; SSF53822; Periplasmic binding protein-like I; 1.
DR PROSITE; PS50943; HTH_CROC1; 1.
DR PROSITE; PS00356; HTH_LACI_1; 1.
DR PROSITE; PS50932; HTH_LACI_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Plasmid {ECO:0000313|EMBL:ACP23683.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000001054};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 8..62
FT /note="HTH lacI-type"
FT /evidence="ECO:0000259|PROSITE:PS50932"
FT DOMAIN 8..38
FT /note="HTH cro/C1-type"
FT /evidence="ECO:0000259|PROSITE:PS50943"
SQ SEQUENCE 340 AA; 36882 MW; 097D049BFA3ABBFA CRC64;
MSSRGKVITL QEVADRAGVS RMTVSKVLRG AGNISAETRQ RVKQAADELG YLPNNLAGSL
SSRKSRMVAV IIPSISDIVF SEVLSGINAT LRPRGFQTFI GESGFDPETE TELIRAMLSF
RPAGILLNGG MARSADAESL LARRTCPAIQ LWDCDRRALD FSAGPSHEEA GHLVARHFLE
RGRRRIAYVG AELDKDLCAR RRHLALKSSL AAAGIDLLSV TAEDRPRQAV TGRFLTEQLV
RTHPGIEAIH FLNDAMALGG LSYLHDAGFP VPERISVVGF NGTSLANAVR TRLTTIDLPR
TEIGEKAAQA LLQMIAEESV PDVWRAPLAL VQGNTTRPDK
//
