ID C3KRM9_SINFN Unreviewed; 292 AA.
AC C3KRM9;
DT 16-JUN-2009, integrated into UniProtKB/TrEMBL.
DT 16-JUN-2009, sequence version 1.
DT 24-JAN-2024, entry version 100.
DE SubName: Full=Transcriptional regulator, DeoR family {ECO:0000313|EMBL:ACP22737.1};
GN OrderedLocusNames=NGR_b12860 {ECO:0000313|EMBL:ACP22737.1};
OS Sinorhizobium fredii (strain NBRC 101917 / NGR234).
OG Plasmid sym pNGR234b {ECO:0000313|Proteomes:UP000001054}.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
OC Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.
OX NCBI_TaxID=394 {ECO:0000313|EMBL:ACP22737.1, ECO:0000313|Proteomes:UP000001054};
RN [1] {ECO:0000313|Proteomes:UP000001054}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NBRC 101917 / NGR234 {ECO:0000313|Proteomes:UP000001054};
RX PubMed=14702322; DOI=10.1128/JB.186.2.535-542.2004;
RA Streit W.R., Schmitz R.A., Perret X., Staehelin C., Deakin W.J., Raasch C.,
RA Liesegang H., Broughton W.J.;
RT "An evolutionary hot spot: the pNGR234b replicon of Rhizobium sp. strain
RT NGR234.";
RL J. Bacteriol. 186:535-542(2004).
RN [2] {ECO:0000313|EMBL:ACP22737.1, ECO:0000313|Proteomes:UP000001054}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NBRC 101917 / NGR234 {ECO:0000313|Proteomes:UP000001054};
RX PubMed=19376903; DOI=10.1128/AEM.00515-09;
RA Schmeisser C., Liesegang H., Krysciak D., Bakkou N., Le Quere A.,
RA Wollherr A., Heinemeyer I., Morgenstern B., Pommerening-Roeser A.,
RA Flores M., Palacios R., Brenner S., Gottschalk G., Schmitz R.A.,
RA Broughton W.J., Perret X., Strittmatter A.W., Streit W.R.;
RT "Rhizobium sp. strain NGR234 possesses a remarkable number of secretion
RT systems.";
RL Appl. Environ. Microbiol. 75:4035-4045(2009).
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DR EMBL; CP000874; ACP22737.1; -; Genomic_DNA.
DR RefSeq; YP_002823490.1; NC_012586.1.
DR AlphaFoldDB; C3KRM9; -.
DR KEGG; rhi:NGR_b12860; -.
DR PATRIC; fig|394.7.peg.1693; -.
DR HOGENOM; CLU_060699_4_0_5; -.
DR OMA; CFHFHEV; -.
DR OrthoDB; 31600at2; -.
DR Proteomes; UP000001054; Plasmid sym pNGR234b.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR Gene3D; 3.40.50.1360; -; 1.
DR InterPro; IPR014036; DeoR_C.
DR InterPro; IPR001034; DeoR_HTH.
DR InterPro; IPR037171; NagB/RpiA_transferase-like.
DR InterPro; IPR018356; Tscrpt_reg_HTH_DeoR_CS.
DR PANTHER; PTHR30363:SF8; DEOXYRIBOSE OPERON REPRESSOR; 1.
DR PANTHER; PTHR30363; HTH-TYPE TRANSCRIPTIONAL REGULATOR SRLR-RELATED; 1.
DR Pfam; PF00455; DeoRC; 1.
DR Pfam; PF08220; HTH_DeoR; 1.
DR SMART; SM01134; DeoRC; 1.
DR SMART; SM00420; HTH_DEOR; 1.
DR SUPFAM; SSF100950; NagB/RpiA/CoA transferase-like; 1.
DR PROSITE; PS00894; HTH_DEOR_1; 1.
DR PROSITE; PS51000; HTH_DEOR_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Plasmid {ECO:0000313|EMBL:ACP22737.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000001054};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 49..101
FT /note="HTH deoR-type"
FT /evidence="ECO:0000259|PROSITE:PS51000"
SQ SEQUENCE 292 AA; 31718 MW; 5164B0FED8407167 CRC64;
MWRAEARPRR RAPLADRTRF VIFLTNIVAQ QPPGPRHVVL SGRAMANRKA TRIIALAEAL
SVRRVLHLKD AAALLGVSEM TVRRDIADNP GLFGYLGGHI VPAADIEADA PYDLAREADS
HATAKREACV HAARHIRPDE TIFIDCGTTL EYLVDLIPES YSITAVCYSL NVADRLTRRP
NVRIVMLGGV YHPSSASFSG NSGLETLDHL GINVAFLSAA GVDPDRGATC VHFHEVPVKQ
KVISLARENY LVVDNSKIGR LKAAFFAPLA AFRAVITEDG EATLPALEAS RG
//