ID C3Y4A7_BRAFL Unreviewed; 389 AA.
AC C3Y4A7;
DT 28-JUL-2009, integrated into UniProtKB/TrEMBL.
DT 28-JUL-2009, sequence version 1.
DT 24-JAN-2024, entry version 58.
DE RecName: Full=FF domain-containing protein {ECO:0000259|PROSITE:PS51676};
GN ORFNames=BRAFLDRAFT_126144 {ECO:0000313|EMBL:EEN65133.1};
OS Branchiostoma floridae (Florida lancelet) (Amphioxus).
OC Eukaryota; Metazoa; Chordata; Cephalochordata; Leptocardii; Amphioxiformes;
OC Branchiostomatidae; Branchiostoma.
OX NCBI_TaxID=7739;
RN [1] {ECO:0000313|EMBL:EEN65133.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=S238N-H82 {ECO:0000313|EMBL:EEN65133.1};
RC TISSUE=Testes {ECO:0000313|EMBL:EEN65133.1};
RX PubMed=18563158; DOI=10.1038/nature06967;
RG US DOE Joint Genome Institute (JGI-PGF);
RA Putnam N.H., Butts T., Ferrier D.E.K., Furlong R.F., Hellsten U.,
RA Kawashima T., Robinson-Rechavi M., Shoguchi E., Terry A., Yu J.-K.,
RA Benito-Gutierrez E.L., Dubchak I., Garcia-Fernandez J., Gibson-Brown J.J.,
RA Grigoriev I.V., Horton A.C., de Jong P.J., Jurka J., Kapitonov V.V.,
RA Kohara Y., Kuroki Y., Lindquist E., Lucas S., Osoegawa K., Pennacchio L.A.,
RA Salamov A.A., Satou Y., Sauka-Spengler T., Schmutz J., Shin-I T.,
RA Toyoda A., Bronner-Fraser M., Fujiyama A., Holland L.Z., Holland P.W.H.,
RA Satoh N., Rokhsar D.S.;
RT "The amphioxus genome and the evolution of the chordate karyotype.";
RL Nature 453:1064-1071(2008).
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DR EMBL; GG666484; EEN65133.1; -; Genomic_DNA.
DR RefSeq; XP_002609123.1; XM_002609077.1.
DR AlphaFoldDB; C3Y4A7; -.
DR STRING; 7739.C3Y4A7; -.
DR eggNOG; KOG0155; Eukaryota.
DR InParanoid; C3Y4A7; -.
DR GO; GO:0070063; F:RNA polymerase binding; IEA:InterPro.
DR GO; GO:0003712; F:transcription coregulator activity; IEA:InterPro.
DR Gene3D; 1.10.10.440; FF domain; 5.
DR InterPro; IPR002713; FF_domain.
DR InterPro; IPR036517; FF_domain_sf.
DR InterPro; IPR045148; TCRG1-like.
DR PANTHER; PTHR15377; TRANSCRIPTION ELONGATION REGULATOR 1; 1.
DR PANTHER; PTHR15377:SF3; WW DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF01846; FF; 5.
DR SMART; SM00441; FF; 5.
DR SUPFAM; SSF81698; FF domain; 5.
DR PROSITE; PS51676; FF; 5.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils}.
FT DOMAIN 16..69
FT /note="FF"
FT /evidence="ECO:0000259|PROSITE:PS51676"
FT DOMAIN 81..136
FT /note="FF"
FT /evidence="ECO:0000259|PROSITE:PS51676"
FT DOMAIN 148..203
FT /note="FF"
FT /evidence="ECO:0000259|PROSITE:PS51676"
FT DOMAIN 253..309
FT /note="FF"
FT /evidence="ECO:0000259|PROSITE:PS51676"
FT DOMAIN 311..367
FT /note="FF"
FT /evidence="ECO:0000259|PROSITE:PS51676"
FT REGION 207..232
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 68..102
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 389 AA; 47535 MW; D0967F7A28DDE038 CRC64;
MEAEIKAARE RAIVPLDIRM KQFRDMLLER GVSAFSTWDK ELHKIVFDPR YLLLNNKERK
QVFEQYVKQR AEDERKEKRS KLKEAKEEFV QLMEEAKISA KTSFSEFAMK NGKDHRFKAI
EKMRDREALF SEFMTTLRKK EKETSRSRAE KVKQDFTDLL KEQNVDKYSR WSKVKDKVES
DSRYKAVDSS HLREEWFKMY VETKAKEEDA EKEREKERQR RAEESLKERQ REVQKERSEL
IREVDREREQ HKRDEATQHF KALLADMVRN ADANWRETRR QLRKDHRWEL ANLLDRDEKE
KLFNEHIDML TKKKREQFKQ LLDETSEITL MSSWKEVRKI IKDDPRFSKF SSSDRKRERE
FNDYIRDKFV AAKADFRTLL KETKFITYK
//
