ID C3Y4X3_BRAFL Unreviewed; 343 AA.
AC C3Y4X3;
DT 28-JUL-2009, integrated into UniProtKB/TrEMBL.
DT 28-JUL-2009, sequence version 1.
DT 24-JAN-2024, entry version 79.
DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EEN64780.1};
GN ORFNames=BRAFLDRAFT_212110 {ECO:0000313|EMBL:EEN64780.1};
OS Branchiostoma floridae (Florida lancelet) (Amphioxus).
OC Eukaryota; Metazoa; Chordata; Cephalochordata; Leptocardii; Amphioxiformes;
OC Branchiostomatidae; Branchiostoma.
OX NCBI_TaxID=7739;
RN [1] {ECO:0000313|EMBL:EEN64780.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=S238N-H82 {ECO:0000313|EMBL:EEN64780.1};
RC TISSUE=Testes {ECO:0000313|EMBL:EEN64780.1};
RX PubMed=18563158; DOI=10.1038/nature06967;
RG US DOE Joint Genome Institute (JGI-PGF);
RA Putnam N.H., Butts T., Ferrier D.E.K., Furlong R.F., Hellsten U.,
RA Kawashima T., Robinson-Rechavi M., Shoguchi E., Terry A., Yu J.-K.,
RA Benito-Gutierrez E.L., Dubchak I., Garcia-Fernandez J., Gibson-Brown J.J.,
RA Grigoriev I.V., Horton A.C., de Jong P.J., Jurka J., Kapitonov V.V.,
RA Kohara Y., Kuroki Y., Lindquist E., Lucas S., Osoegawa K., Pennacchio L.A.,
RA Salamov A.A., Satou Y., Sauka-Spengler T., Schmutz J., Shin-I T.,
RA Toyoda A., Bronner-Fraser M., Fujiyama A., Holland L.Z., Holland P.W.H.,
RA Satoh N., Rokhsar D.S.;
RT "The amphioxus genome and the evolution of the chordate karyotype.";
RL Nature 453:1064-1071(2008).
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DR EMBL; GG666486; EEN64780.1; -; Genomic_DNA.
DR RefSeq; XP_002608770.1; XM_002608724.1.
DR AlphaFoldDB; C3Y4X3; -.
DR STRING; 7739.C3Y4X3; -.
DR eggNOG; KOG3561; Eukaryota.
DR InParanoid; C3Y4X3; -.
DR GO; GO:0005634; C:nucleus; IEA:InterPro.
DR GO; GO:0030374; F:nuclear receptor coactivator activity; IEA:InterPro.
DR GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR CDD; cd00130; PAS; 1.
DR Gene3D; 4.10.280.10; Helix-loop-helix DNA-binding domain; 1.
DR Gene3D; 3.30.450.20; PAS domain; 2.
DR InterPro; IPR011598; bHLH_dom.
DR InterPro; IPR036638; HLH_DNA-bd_sf.
DR InterPro; IPR017426; Nuclear_rcpt_coactivator.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR PANTHER; PTHR10684; NUCLEAR RECEPTOR COACTIVATOR; 1.
DR PANTHER; PTHR10684:SF4; TAIMAN, ISOFORM G; 1.
DR Pfam; PF00010; HLH; 1.
DR Pfam; PF14598; PAS_11; 1.
DR SMART; SM00353; HLH; 1.
DR SMART; SM00091; PAS; 1.
DR SUPFAM; SSF47459; HLH, helix-loop-helix DNA-binding domain; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 2.
DR PROSITE; PS50888; BHLH; 1.
DR PROSITE; PS50112; PAS; 1.
PE 4: Predicted;
FT DOMAIN 1..53
FT /note="BHLH"
FT /evidence="ECO:0000259|PROSITE:PS50888"
FT DOMAIN 89..153
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
SQ SEQUENCE 343 AA; 38473 MW; 29E6E827DF845169 CRC64;
MSKCVQEKKR REQEKMYIEE LAELISSNME NLMTIKADKC AILQEAVKQI KALRHQGRTE
SAAREAVQQS DVSSSGQSLL PSNVLGNLLL EALNGFLFVV NSQGKLEFIS NNVQNYLSYT
HDELMGSSVY NIIHVGDHTQ FVNCLLPMSL GNGVGWAPDA AGKKCRSFQC RMMVKLEAEE
DMEKHRTQTP QYKTMQCSAV YHPHPTKGKT EDGNDVPEAC LVCIASKVAE ATDVETVMPL
EQFSTRQDIN GKILAVDTSG LSTSVPHGEI VRRCLTELYK DCEAWVMSKH HREVMACGTA
TSQIYKFQLP GGNWVHAQTK SKLFRNPETK EPQYIMSMYS LIR
//
