GenomeNet

Database: UniProt
Entry: C3YCX8_BRAFL
LinkDB: C3YCX8_BRAFL
Original site: C3YCX8_BRAFL 
ID   C3YCX8_BRAFL            Unreviewed;       377 AA.
AC   C3YCX8;
DT   28-JUL-2009, integrated into UniProtKB/TrEMBL.
DT   28-JUL-2009, sequence version 1.
DT   24-JAN-2024, entry version 59.
DE   RecName: Full=C-type lectin domain-containing protein {ECO:0008006|Google:ProtNLM};
GN   ORFNames=BRAFLDRAFT_87407 {ECO:0000313|EMBL:EEN61929.1};
OS   Branchiostoma floridae (Florida lancelet) (Amphioxus).
OC   Eukaryota; Metazoa; Chordata; Cephalochordata; Leptocardii; Amphioxiformes;
OC   Branchiostomatidae; Branchiostoma.
OX   NCBI_TaxID=7739;
RN   [1] {ECO:0000313|EMBL:EEN61929.1}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=S238N-H82 {ECO:0000313|EMBL:EEN61929.1};
RC   TISSUE=Testes {ECO:0000313|EMBL:EEN61929.1};
RX   PubMed=18563158; DOI=10.1038/nature06967;
RG   US DOE Joint Genome Institute (JGI-PGF);
RA   Putnam N.H., Butts T., Ferrier D.E.K., Furlong R.F., Hellsten U.,
RA   Kawashima T., Robinson-Rechavi M., Shoguchi E., Terry A., Yu J.-K.,
RA   Benito-Gutierrez E.L., Dubchak I., Garcia-Fernandez J., Gibson-Brown J.J.,
RA   Grigoriev I.V., Horton A.C., de Jong P.J., Jurka J., Kapitonov V.V.,
RA   Kohara Y., Kuroki Y., Lindquist E., Lucas S., Osoegawa K., Pennacchio L.A.,
RA   Salamov A.A., Satou Y., Sauka-Spengler T., Schmutz J., Shin-I T.,
RA   Toyoda A., Bronner-Fraser M., Fujiyama A., Holland L.Z., Holland P.W.H.,
RA   Satoh N., Rokhsar D.S.;
RT   "The amphioxus genome and the evolution of the chordate karyotype.";
RL   Nature 453:1064-1071(2008).
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DR   EMBL; GG666502; EEN61929.1; -; Genomic_DNA.
DR   RefSeq; XP_002605919.1; XM_002605873.1.
DR   AlphaFoldDB; C3YCX8; -.
DR   eggNOG; KOG4297; Eukaryota.
DR   InParanoid; C3YCX8; -.
DR   GO; GO:0005576; C:extracellular region; IEA:InterPro.
DR   GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR   GO; GO:0007585; P:respiratory gaseous exchange by respiratory system; IEA:InterPro.
DR   CDD; cd00037; CLECT; 1.
DR   Gene3D; 3.30.390.150; -; 1.
DR   Gene3D; 3.10.100.10; Mannose-Binding Protein A, subunit A; 1.
DR   InterPro; IPR007084; BRICHOS_dom.
DR   InterPro; IPR001304; C-type_lectin-like.
DR   InterPro; IPR016186; C-type_lectin-like/link_sf.
DR   InterPro; IPR016187; CTDL_fold.
DR   InterPro; IPR001729; SP-C.
DR   PANTHER; PTHR10800; PULMONARY SURFACTANT-ASSOCIATED PROTEIN C; 1.
DR   PANTHER; PTHR10800:SF4; PULMONARY SURFACTANT-ASSOCIATED PROTEIN C; 1.
DR   Pfam; PF04089; BRICHOS; 1.
DR   Pfam; PF00059; Lectin_C; 1.
DR   SMART; SM01039; BRICHOS; 1.
DR   SMART; SM00034; CLECT; 1.
DR   SUPFAM; SSF56436; C-type lectin-like; 1.
DR   PROSITE; PS50869; BRICHOS; 1.
DR   PROSITE; PS50041; C_TYPE_LECTIN_2; 1.
PE   4: Predicted;
KW   Disulfide bond {ECO:0000256|ARBA:ARBA00023157};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Secreted {ECO:0000256|ARBA:ARBA00022525};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM        172..198
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   DOMAIN          29..127
FT                   /note="C-type lectin"
FT                   /evidence="ECO:0000259|PROSITE:PS50041"
FT   DOMAIN          236..332
FT                   /note="BRICHOS"
FT                   /evidence="ECO:0000259|PROSITE:PS50869"
FT   REGION          333..368
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        348..362
FT                   /note="Acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   377 AA;  41359 MW;  70B2BB838892692E CRC64;
     MADTNVPAHL GGLDKTVSKK SCPKGWTERN SHCYKLTRNK ASWTEANQQC KKLGALLASV
     QDAAENKLIA SLITNAPQGK LPLVWIGLSR NAGQMQWADG SRLSYTNWAS GEPSIITLRE
     DCVGMYSKNQ PKMTSYDEKK TLPPAEVLPG GVFPDEIAAI KKRVRGENMS RLKIGIAVGS
     VVLVILAVVG GTLLGLHLNR KPNVVVRSVQ LTIENEIMEE TVEVDKEKDT ETFRTVSSTG
     TSFVIRDMSN SLSAYRFDGD EKCYVLYESL EEAEDTAELL EDLEQMEEGE VDAAVRRPGA
     FLSVDESRGQ VDRSVLSESM LEFCEGLRTH WAVKSSTEPT PTPGATMEDE GEEAEEEADP
     EMEVPTGTNA FPYCVSL
//
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