ID C3YCX8_BRAFL Unreviewed; 377 AA.
AC C3YCX8;
DT 28-JUL-2009, integrated into UniProtKB/TrEMBL.
DT 28-JUL-2009, sequence version 1.
DT 24-JAN-2024, entry version 59.
DE RecName: Full=C-type lectin domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=BRAFLDRAFT_87407 {ECO:0000313|EMBL:EEN61929.1};
OS Branchiostoma floridae (Florida lancelet) (Amphioxus).
OC Eukaryota; Metazoa; Chordata; Cephalochordata; Leptocardii; Amphioxiformes;
OC Branchiostomatidae; Branchiostoma.
OX NCBI_TaxID=7739;
RN [1] {ECO:0000313|EMBL:EEN61929.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=S238N-H82 {ECO:0000313|EMBL:EEN61929.1};
RC TISSUE=Testes {ECO:0000313|EMBL:EEN61929.1};
RX PubMed=18563158; DOI=10.1038/nature06967;
RG US DOE Joint Genome Institute (JGI-PGF);
RA Putnam N.H., Butts T., Ferrier D.E.K., Furlong R.F., Hellsten U.,
RA Kawashima T., Robinson-Rechavi M., Shoguchi E., Terry A., Yu J.-K.,
RA Benito-Gutierrez E.L., Dubchak I., Garcia-Fernandez J., Gibson-Brown J.J.,
RA Grigoriev I.V., Horton A.C., de Jong P.J., Jurka J., Kapitonov V.V.,
RA Kohara Y., Kuroki Y., Lindquist E., Lucas S., Osoegawa K., Pennacchio L.A.,
RA Salamov A.A., Satou Y., Sauka-Spengler T., Schmutz J., Shin-I T.,
RA Toyoda A., Bronner-Fraser M., Fujiyama A., Holland L.Z., Holland P.W.H.,
RA Satoh N., Rokhsar D.S.;
RT "The amphioxus genome and the evolution of the chordate karyotype.";
RL Nature 453:1064-1071(2008).
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DR EMBL; GG666502; EEN61929.1; -; Genomic_DNA.
DR RefSeq; XP_002605919.1; XM_002605873.1.
DR AlphaFoldDB; C3YCX8; -.
DR eggNOG; KOG4297; Eukaryota.
DR InParanoid; C3YCX8; -.
DR GO; GO:0005576; C:extracellular region; IEA:InterPro.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0007585; P:respiratory gaseous exchange by respiratory system; IEA:InterPro.
DR CDD; cd00037; CLECT; 1.
DR Gene3D; 3.30.390.150; -; 1.
DR Gene3D; 3.10.100.10; Mannose-Binding Protein A, subunit A; 1.
DR InterPro; IPR007084; BRICHOS_dom.
DR InterPro; IPR001304; C-type_lectin-like.
DR InterPro; IPR016186; C-type_lectin-like/link_sf.
DR InterPro; IPR016187; CTDL_fold.
DR InterPro; IPR001729; SP-C.
DR PANTHER; PTHR10800; PULMONARY SURFACTANT-ASSOCIATED PROTEIN C; 1.
DR PANTHER; PTHR10800:SF4; PULMONARY SURFACTANT-ASSOCIATED PROTEIN C; 1.
DR Pfam; PF04089; BRICHOS; 1.
DR Pfam; PF00059; Lectin_C; 1.
DR SMART; SM01039; BRICHOS; 1.
DR SMART; SM00034; CLECT; 1.
DR SUPFAM; SSF56436; C-type lectin-like; 1.
DR PROSITE; PS50869; BRICHOS; 1.
DR PROSITE; PS50041; C_TYPE_LECTIN_2; 1.
PE 4: Predicted;
KW Disulfide bond {ECO:0000256|ARBA:ARBA00023157};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Secreted {ECO:0000256|ARBA:ARBA00022525};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 172..198
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 29..127
FT /note="C-type lectin"
FT /evidence="ECO:0000259|PROSITE:PS50041"
FT DOMAIN 236..332
FT /note="BRICHOS"
FT /evidence="ECO:0000259|PROSITE:PS50869"
FT REGION 333..368
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 348..362
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 377 AA; 41359 MW; 70B2BB838892692E CRC64;
MADTNVPAHL GGLDKTVSKK SCPKGWTERN SHCYKLTRNK ASWTEANQQC KKLGALLASV
QDAAENKLIA SLITNAPQGK LPLVWIGLSR NAGQMQWADG SRLSYTNWAS GEPSIITLRE
DCVGMYSKNQ PKMTSYDEKK TLPPAEVLPG GVFPDEIAAI KKRVRGENMS RLKIGIAVGS
VVLVILAVVG GTLLGLHLNR KPNVVVRSVQ LTIENEIMEE TVEVDKEKDT ETFRTVSSTG
TSFVIRDMSN SLSAYRFDGD EKCYVLYESL EEAEDTAELL EDLEQMEEGE VDAAVRRPGA
FLSVDESRGQ VDRSVLSESM LEFCEGLRTH WAVKSSTEPT PTPGATMEDE GEEAEEEADP
EMEVPTGTNA FPYCVSL
//