ID C3YGT6_BRAFL Unreviewed; 1020 AA.
AC C3YGT6;
DT 28-JUL-2009, integrated into UniProtKB/TrEMBL.
DT 28-JUL-2009, sequence version 1.
DT 27-MAR-2024, entry version 77.
DE RecName: Full=C2H2-type domain-containing protein {ECO:0000259|PROSITE:PS50157};
GN ORFNames=BRAFLDRAFT_58764 {ECO:0000313|EMBL:EEN60407.1};
OS Branchiostoma floridae (Florida lancelet) (Amphioxus).
OC Eukaryota; Metazoa; Chordata; Cephalochordata; Leptocardii; Amphioxiformes;
OC Branchiostomatidae; Branchiostoma.
OX NCBI_TaxID=7739;
RN [1] {ECO:0000313|EMBL:EEN60407.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=S238N-H82 {ECO:0000313|EMBL:EEN60407.1};
RC TISSUE=Testes {ECO:0000313|EMBL:EEN60407.1};
RX PubMed=18563158; DOI=10.1038/nature06967;
RG US DOE Joint Genome Institute (JGI-PGF);
RA Putnam N.H., Butts T., Ferrier D.E.K., Furlong R.F., Hellsten U.,
RA Kawashima T., Robinson-Rechavi M., Shoguchi E., Terry A., Yu J.-K.,
RA Benito-Gutierrez E.L., Dubchak I., Garcia-Fernandez J., Gibson-Brown J.J.,
RA Grigoriev I.V., Horton A.C., de Jong P.J., Jurka J., Kapitonov V.V.,
RA Kohara Y., Kuroki Y., Lindquist E., Lucas S., Osoegawa K., Pennacchio L.A.,
RA Salamov A.A., Satou Y., Sauka-Spengler T., Schmutz J., Shin-I T.,
RA Toyoda A., Bronner-Fraser M., Fujiyama A., Holland L.Z., Holland P.W.H.,
RA Satoh N., Rokhsar D.S.;
RT "The amphioxus genome and the evolution of the chordate karyotype.";
RL Nature 453:1064-1071(2008).
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DR EMBL; GG666512; EEN60407.1; -; Genomic_DNA.
DR RefSeq; XP_002604396.1; XM_002604350.1.
DR AlphaFoldDB; C3YGT6; -.
DR eggNOG; KOG1721; Eukaryota.
DR InParanoid; C3YGT6; -.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0001228; F:DNA-binding transcription activator activity, RNA polymerase II-specific; IBA:GO_Central.
DR GO; GO:0000978; F:RNA polymerase II cis-regulatory region sequence-specific DNA binding; IBA:GO_Central.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR Gene3D; 3.30.160.60; Classic Zinc Finger; 36.
DR InterPro; IPR036236; Znf_C2H2_sf.
DR InterPro; IPR013087; Znf_C2H2_type.
DR PANTHER; PTHR24399:SF23; C2H2-TYPE DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR24399; ZINC FINGER AND BTB DOMAIN-CONTAINING; 1.
DR Pfam; PF00096; zf-C2H2; 28.
DR Pfam; PF13894; zf-C2H2_4; 2.
DR Pfam; PF13912; zf-C2H2_6; 4.
DR SMART; SM00355; ZnF_C2H2; 36.
DR SUPFAM; SSF57667; beta-beta-alpha zinc fingers; 19.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 35.
DR PROSITE; PS50157; ZINC_FINGER_C2H2_2; 36.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00042};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00042};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00042}.
FT DOMAIN 1..27
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT DOMAIN 28..55
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT DOMAIN 56..83
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT DOMAIN 84..111
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT DOMAIN 112..139
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT DOMAIN 140..167
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT DOMAIN 168..195
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT DOMAIN 196..223
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT DOMAIN 224..251
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT DOMAIN 252..279
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT DOMAIN 280..307
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT DOMAIN 308..335
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT DOMAIN 336..363
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT DOMAIN 364..391
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT DOMAIN 392..419
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT DOMAIN 420..447
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT DOMAIN 448..475
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT DOMAIN 476..503
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT DOMAIN 504..531
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT DOMAIN 541..568
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT DOMAIN 569..596
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT DOMAIN 597..624
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT DOMAIN 625..652
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT DOMAIN 653..680
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT DOMAIN 681..708
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT DOMAIN 709..736
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT DOMAIN 737..764
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT DOMAIN 765..792
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT DOMAIN 793..820
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT DOMAIN 821..848
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT DOMAIN 849..876
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT DOMAIN 877..904
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT DOMAIN 905..932
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT DOMAIN 933..960
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT DOMAIN 961..988
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT DOMAIN 989..1016
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
SQ SEQUENCE 1020 AA; 119535 MW; 3485A6633D03E8F5 CRC64;
MCEKCGKQFS ALDHLKLHMQ THTGEKPYKC EECNKKFSQL GNLKTHMRIH RGEKPFKCEE
CSKQFRQTGA LKNHMKTHTG EKPFKCEECS KQFSERATLK THVRTHTGEK PYKCKECSRQ
FSEPGSLKSH MRTHTGEKPY RCEECSKQFS QPSDLKKHMR THTGEKPYKC EECSKQFSIL
HHLKTHMRTH TGEKPYKCEE CSKQFSMPGN LKSHMYTHTG EKPFKCEECS KQFSQLSDLK
KHMRIHTGEK PFKCEECSKQ FSRPGHLKIH LRIHTGEKPY KCEECSKQFS QSGSLKTHMR
THTGEKPFNC EECSRQFGRL DCLMAHIRTH TGEKPFKCDK CGMQFRKLGH LGTHMRTHTG
EKKYRCEECS RQFSELGSLK SHMRSHTGEK PYTCEECSKQ FSELSHLKTH MRTHTGEKPY
RCEECSRQFS TMNGLKEHMR THTGEKPYCC EECSKQFRCL GDLKKHMRTH TGEKPYKCEE
CSKQFRHLCS LKEHMRTHTG EKPYTCEVCS KKFSSLSNMK SHQRNRAEEE AAPKQSAAKS
FLCEECSRQF SQLSHLKIHM RTHTGEKPYK CEECSKQFRM LHHLKTHMHT HTGEKPYQCE
ECNKQFTMPS HLKTHMRTHT GEKPYKCEEC SKQFSRPEHL KTHMRTHTGE KPYKCEECSK
QFSQPGSLKI HMRTHTGEKP FKCEECSKQF GRVDCLMAHK RTHTGEKPFQ CERCGMRFRR
LGHLGTHMHT HTGEKKYGCE ECSRQFSALD QLKIHMRTHT GEKPYMCEEC SKRFVAQGDL
KKHMRTHTGE KPYKCEECSR QFSMPGSLKR HMQTHTGEKP YMCGECSKRF SVLADLKKHM
RTHTGEKPYK CEECSKQFSS LYGLKCHMRT HTGEKPYKCE ECSKQFSQLS AHKKHMRIHR
GEKPFTCEEC SRQFSERGSL KKHMRTHTGE KPYMCGECSK RFSVLGDLKT HMRTHTGEKP
YKCAECSKQF SQRSALKTHM VTHTGEKPYT CEECSRQFGH KCALKKHKRT HTSVQQTVSL
//
