ID   C3YJY8_BRAFL            Unreviewed;       924 AA.
AC   C3YJY8;
DT   28-JUL-2009, integrated into UniProtKB/TrEMBL.
DT   28-JUL-2009, sequence version 1.
DT   27-MAR-2024, entry version 55.
DE   RecName: Full=C3H1-type domain-containing protein {ECO:0000259|PROSITE:PS50103};
DE   Flags: Fragment;
GN   ORFNames=BRAFLDRAFT_154326 {ECO:0000313|EMBL:EEN59445.1};
OS   Branchiostoma floridae (Florida lancelet) (Amphioxus).
OC   Eukaryota; Metazoa; Chordata; Cephalochordata; Leptocardii; Amphioxiformes;
OC   Branchiostomatidae; Branchiostoma.
OX   NCBI_TaxID=7739;
RN   [1] {ECO:0000313|EMBL:EEN59445.1}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=S238N-H82 {ECO:0000313|EMBL:EEN59445.1};
RC   TISSUE=Testes {ECO:0000313|EMBL:EEN59445.1};
RX   PubMed=18563158; DOI=10.1038/nature06967;
RG   US DOE Joint Genome Institute (JGI-PGF);
RA   Putnam N.H., Butts T., Ferrier D.E.K., Furlong R.F., Hellsten U.,
RA   Kawashima T., Robinson-Rechavi M., Shoguchi E., Terry A., Yu J.-K.,
RA   Benito-Gutierrez E.L., Dubchak I., Garcia-Fernandez J., Gibson-Brown J.J.,
RA   Grigoriev I.V., Horton A.C., de Jong P.J., Jurka J., Kapitonov V.V.,
RA   Kohara Y., Kuroki Y., Lindquist E., Lucas S., Osoegawa K., Pennacchio L.A.,
RA   Salamov A.A., Satou Y., Sauka-Spengler T., Schmutz J., Shin-I T.,
RA   Toyoda A., Bronner-Fraser M., Fujiyama A., Holland L.Z., Holland P.W.H.,
RA   Satoh N., Rokhsar D.S.;
RT   "The amphioxus genome and the evolution of the chordate karyotype.";
RL   Nature 453:1064-1071(2008).
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DR   EMBL; GG666520; EEN59445.1; -; Genomic_DNA.
DR   RefSeq; XP_002603434.1; XM_002603388.1.
DR   AlphaFoldDB; C3YJY8; -.
DR   STRING; 7739.C3YJY8; -.
DR   eggNOG; KOG1804; Eukaryota.
DR   InParanoid; C3YJY8; -.
DR   GO; GO:0005829; C:cytosol; IBA:GO_Central.
DR   GO; GO:0043186; C:P granule; IBA:GO_Central.
DR   GO; GO:0004386; F:helicase activity; IEA:InterPro.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR   GO; GO:0035194; P:regulatory ncRNA-mediated post-transcriptional gene silencing; IBA:GO_Central.
DR   CDD; cd18077; DEXXQc_HELZ; 1.
DR   CDD; cd18808; SF1_C_Upf1; 1.
DR   Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR   InterPro; IPR045055; DNA2/NAM7-like.
DR   InterPro; IPR041679; DNA2/NAM7-like_C.
DR   InterPro; IPR041677; DNA2/NAM7_AAA_11.
DR   InterPro; IPR049569; HELZ_DEAD-box_1.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR047187; SF1_C_Upf1.
DR   InterPro; IPR000571; Znf_CCCH.
DR   PANTHER; PTHR10887; DNA2/NAM7 HELICASE FAMILY; 1.
DR   PANTHER; PTHR10887:SF365; HELICASE WITH ZINC FINGER DOMAIN-RELATED; 1.
DR   Pfam; PF13086; AAA_11; 2.
DR   Pfam; PF13087; AAA_12; 1.
DR   SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR   PROSITE; PS50103; ZF_C3H1; 1.
PE   4: Predicted;
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00723};
KW   Zinc {ECO:0000256|PROSITE-ProRule:PRU00723};
KW   Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00723}.
FT   DOMAIN          1..14
FT                   /note="C3H1-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50103"
FT   ZN_FING         1..14
FT                   /note="C3H1-type"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT   COILED          9..36
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   NON_TER         1
FT                   /evidence="ECO:0000313|EMBL:EEN59445.1"
FT   NON_TER         924
FT                   /evidence="ECO:0000313|EMBL:EEN59445.1"
SQ   SEQUENCE   924 AA;  104756 MW;  9A8AE2B5835967A5 CRC64;
     CIHGTRCTYA HSEEELKEWE ERYEIRKQKL KAAQTSGRYG SSFAETLVEE YAKAKDKTKV
     VSLISVFQSA MNATAYIPSP LTSRSLGGQG RHEDGELSPG PSLQVRRVAF METSCNQFKI
     NAVNSTSDQP LDGLLSEDGQ EWISHGAQQS NSTGFIVQIS FCSNQYGSFN QDIVFDFGQR
     PFLFCRFNVD VGMETDLDSL KKLRNQFSPL GTSWEDQGKM VHYIDEANMD EDVDEDLVMK
     AKYPPPQDPE KFVNLKVSKE DVLNKFNYRK RQHQLLFIEE AEQSEHIRRL TLQTAGIVSN
     ELKKTLVDST HVEFAHSGEL FIRIDLNETL SEDTPKGYLL TRSLSLKAQV IFTTFVDQDA
     YEVWVEWKTK NSIWLRIPSI VCQHFGLKHD KNVNLEVQFK LDRGPMLFWH CAVDTIKDLT
     FVFPVDPKFS SRFWKKLRKE NPSPPHTLND KQREAFSKIT APAEIAIPPV LLIGPFGTGK
     THTIAAASSA AAQQSGTRIL ICTHSNSAAD LYIRNFLKKD DFPGRASLLR VYYKKRKRST
     VHEDVQRHCV MNEDGTFRYP TREEVATAKI VITTLSLSLV LEREVGLEAG FFTHIMVDEA
     AQALECEAIT PLSLATAKTR VVLAGDHMQL SPKVFSSFAR EKGFHQSLLE RLFYHYQQMV
     PDDDLHPCIT LLHENYRCHN DILKFPSKVF YGGKLICRSE AKRHPNFFPL TFYAVAYGQD
     SVDNTSTSFY NDAEVWELAD RVKELWDSWP EAEWGEKDRK SMAQIGVVTP YQDQVSRIRL
     ALRRKGLAGV TVETVTNVQG KEYRALFLST VRTRATCCAE QLNPPQETPD FGFLSDPKLL
     NTAITRAKSF VGVVGDPVSL CSVGSCSKYW LEYIEDCSKY GGLHGTSVEE VKHYLNMLEM
     GASSLPVVSV LRPEAEIFRP RGVQ
//