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Database: UniProt
Entry: C3YQP4_BRAFL
LinkDB: C3YQP4_BRAFL
Original site: C3YQP4_BRAFL 
ID   C3YQP4_BRAFL            Unreviewed;       321 AA.
AC   C3YQP4;
DT   28-JUL-2009, integrated into UniProtKB/TrEMBL.
DT   28-JUL-2009, sequence version 1.
DT   05-JUN-2019, entry version 71.
DE   SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EEN57400.1};
GN   ORFNames=BRAFLDRAFT_130399 {ECO:0000313|EMBL:EEN57400.1};
OS   Branchiostoma floridae (Florida lancelet) (Amphioxus).
OC   Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae;
OC   Branchiostoma.
OX   NCBI_TaxID=7739 {ECO:0000313|Proteomes:UP000001554};
RN   [1] {ECO:0000313|EMBL:EEN57400.1, ECO:0000313|Proteomes:UP000001554}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=S238N-H82 {ECO:0000313|EMBL:EEN57400.1,
RC   ECO:0000313|Proteomes:UP000001554};
RC   TISSUE=Testes {ECO:0000313|EMBL:EEN57400.1};
RX   PubMed=18563158; DOI=10.1038/nature06967;
RG   US DOE Joint Genome Institute (JGI-PGF);
RA   Putnam N.H., Butts T., Ferrier D.E.K., Furlong R.F., Hellsten U.,
RA   Kawashima T., Robinson-Rechavi M., Shoguchi E., Terry A., Yu J.-K.,
RA   Benito-Gutierrez E.L., Dubchak I., Garcia-Fernandez J.,
RA   Gibson-Brown J.J., Grigoriev I.V., Horton A.C., de Jong P.J.,
RA   Jurka J., Kapitonov V.V., Kohara Y., Kuroki Y., Lindquist E.,
RA   Lucas S., Osoegawa K., Pennacchio L.A., Salamov A.A., Satou Y.,
RA   Sauka-Spengler T., Schmutz J., Shin-I T., Toyoda A.,
RA   Bronner-Fraser M., Fujiyama A., Holland L.Z., Holland P.W.H.,
RA   Satoh N., Rokhsar D.S.;
RT   "The amphioxus genome and the evolution of the chordate karyotype.";
RL   Nature 453:1064-1071(2008).
CC   -!- SIMILARITY: Belongs to the bZIP family.
CC       {ECO:0000256|SAAS:SAAS00810676}.
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DR   EMBL; GG666543; EEN57400.1; -; Genomic_DNA.
DR   RefSeq; XP_002601388.1; XM_002601342.1.
DR   STRING; 7739.XP_002601388.1; -.
DR   GeneID; 7210770; -.
DR   KEGG; bfo:BRAFLDRAFT_130399; -.
DR   eggNOG; KOG0837; Eukaryota.
DR   eggNOG; ENOG410XRWH; LUCA.
DR   InParanoid; C3YQP4; -.
DR   KO; K04448; -.
DR   OMA; APVYANL; -.
DR   OrthoDB; 1090460at2759; -.
DR   Proteomes; UP000001554; Partially assembled WGS sequence.
DR   GO; GO:0000790; C:nuclear chromatin; IBA:GO_Central.
DR   GO; GO:0005654; C:nucleoplasm; IBA:GO_Central.
DR   GO; GO:0005667; C:transcription factor complex; IBA:GO_Central.
DR   GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; IBA:GO_Central.
DR   GO; GO:0000978; F:RNA polymerase II proximal promoter sequence-specific DNA binding; IBA:GO_Central.
DR   GO; GO:0003713; F:transcription coactivator activity; IBA:GO_Central.
DR   GO; GO:0008134; F:transcription factor binding; IBA:GO_Central.
DR   GO; GO:0032870; P:cellular response to hormone stimulus; IBA:GO_Central.
DR   GO; GO:0000122; P:negative regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR   GO; GO:0045597; P:positive regulation of cell differentiation; IBA:GO_Central.
DR   GO; GO:0045944; P:positive regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR   GO; GO:0051726; P:regulation of cell cycle; IBA:GO_Central.
DR   GO; GO:0051591; P:response to cAMP; IBA:GO_Central.
DR   GO; GO:0034097; P:response to cytokine; IBA:GO_Central.
DR   GO; GO:0042493; P:response to drug; IBA:GO_Central.
DR   GO; GO:0032496; P:response to lipopolysaccharide; IBA:GO_Central.
DR   GO; GO:0009612; P:response to mechanical stimulus; IBA:GO_Central.
DR   GO; GO:0010033; P:response to organic substance; IBA:GO_Central.
DR   GO; GO:0009314; P:response to radiation; IBA:GO_Central.
DR   InterPro; IPR004827; bZIP.
DR   InterPro; IPR015558; C_Jun/v-Jun.
DR   InterPro; IPR005643; JNK.
DR   InterPro; IPR002112; Leuzip_Jun.
DR   InterPro; IPR008917; TF_DNA-bd_sf.
DR   PANTHER; PTHR11462:SF8; PTHR11462:SF8; 1.
DR   Pfam; PF00170; bZIP_1; 1.
DR   Pfam; PF03957; Jun; 1.
DR   PRINTS; PR00043; LEUZIPPRJUN.
DR   SMART; SM00338; BRLZ; 1.
DR   SUPFAM; SSF47454; SSF47454; 1.
DR   PROSITE; PS50217; BZIP; 1.
DR   PROSITE; PS00036; BZIP_BASIC; 1.
PE   3: Inferred from homology;
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Complete proteome {ECO:0000313|Proteomes:UP000001554};
KW   DNA-binding {ECO:0000256|SAAS:SAAS00812580};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001554};
KW   Transcription {ECO:0000256|SAAS:SAAS01002396};
KW   Transcription regulation {ECO:0000256|SAAS:SAAS01001750}.
FT   DOMAIN      242    305       BZIP. {ECO:0000259|PROSITE:PS50217}.
FT   REGION      139    165       Disordered. {ECO:0000256|MobiDB-lite:
FT                                C3YQP4}.
FT   COILED      247    294       {ECO:0000256|SAM:Coils}.
FT   COMPBIAS    139    155       Polar. {ECO:0000256|MobiDB-lite:C3YQP4}.
SQ   SEQUENCE   321 AA;  35503 MW;  16571E3DCE87955C CRC64;
     MALKMETSFY HDSELHSMPQ SKYANPGYSR IPDTKPNVAP QDMRKSLTLD FQNTSKKPHL
     QNILGTPELN LLKLGSPELE RLIIQSNGLV TTTPTPTQFI FPKNVTDEQE QYAAGFVAAL
     ERLHRDEMVD PSGSQPCAQM ATNSTATAST SYPGAPPPLS HQPTYHTLTA MSTTTALPGS
     TVEHHPTPTT AANTNAACSS SSTAPLQHHT LSRPIKEEPQ TVPHQAMTAL PTGPIDMETQ
     ELIKAERKRL RNRIAASKCR KRKLERISRL ESKVKDLKTQ NTDLSTTANQ LREQVCQLKQ
     KVMEHVNSGC QVMLTQQLSF N
//
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