ID C3YWG2_BRAFL Unreviewed; 590 AA.
AC C3YWG2;
DT 28-JUL-2009, integrated into UniProtKB/TrEMBL.
DT 28-JUL-2009, sequence version 1.
DT 24-JAN-2024, entry version 51.
DE RecName: Full=SID1 transmembrane family member 1 {ECO:0008006|Google:ProtNLM};
GN ORFNames=BRAFLDRAFT_64452 {ECO:0000313|EMBL:EEN55206.1};
OS Branchiostoma floridae (Florida lancelet) (Amphioxus).
OC Eukaryota; Metazoa; Chordata; Cephalochordata; Leptocardii; Amphioxiformes;
OC Branchiostomatidae; Branchiostoma.
OX NCBI_TaxID=7739;
RN [1] {ECO:0000313|EMBL:EEN55206.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=S238N-H82 {ECO:0000313|EMBL:EEN55206.1};
RC TISSUE=Testes {ECO:0000313|EMBL:EEN55206.1};
RX PubMed=18563158; DOI=10.1038/nature06967;
RG US DOE Joint Genome Institute (JGI-PGF);
RA Putnam N.H., Butts T., Ferrier D.E.K., Furlong R.F., Hellsten U.,
RA Kawashima T., Robinson-Rechavi M., Shoguchi E., Terry A., Yu J.-K.,
RA Benito-Gutierrez E.L., Dubchak I., Garcia-Fernandez J., Gibson-Brown J.J.,
RA Grigoriev I.V., Horton A.C., de Jong P.J., Jurka J., Kapitonov V.V.,
RA Kohara Y., Kuroki Y., Lindquist E., Lucas S., Osoegawa K., Pennacchio L.A.,
RA Salamov A.A., Satou Y., Sauka-Spengler T., Schmutz J., Shin-I T.,
RA Toyoda A., Bronner-Fraser M., Fujiyama A., Holland L.Z., Holland P.W.H.,
RA Satoh N., Rokhsar D.S.;
RT "The amphioxus genome and the evolution of the chordate karyotype.";
RL Nature 453:1064-1071(2008).
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-
CC pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
CC -!- SIMILARITY: Belongs to the SID1 family.
CC {ECO:0000256|ARBA:ARBA00006618}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; GG666561; EEN55206.1; -; Genomic_DNA.
DR RefSeq; XP_002599194.1; XM_002599148.1.
DR AlphaFoldDB; C3YWG2; -.
DR STRING; 7739.C3YWG2; -.
DR eggNOG; ENOG502QUXZ; Eukaryota.
DR InParanoid; C3YWG2; -.
DR GO; GO:0005764; C:lysosome; IBA:GO_Central.
DR GO; GO:0005886; C:plasma membrane; IBA:GO_Central.
DR GO; GO:0003725; F:double-stranded RNA binding; IBA:GO_Central.
DR GO; GO:0051033; F:RNA transmembrane transporter activity; IBA:GO_Central.
DR GO; GO:0050658; P:RNA transport; IBA:GO_Central.
DR InterPro; IPR025958; SID1_TM_fam.
DR PANTHER; PTHR12185:SF14; CHOLESTEROL UPTAKE PROTEIN 1; 1.
DR PANTHER; PTHR12185; SID1 TRANSMEMBRANE FAMILY MEMEBER; 1.
DR Pfam; PF13965; SID-1_RNA_chan; 1.
PE 3: Inferred from homology;
KW Glycoprotein {ECO:0000256|ARBA:ARBA00023180};
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW Signal {ECO:0000256|ARBA:ARBA00022729, ECO:0000256|SAM:SignalP};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW ECO:0000256|SAM:Phobius}.
FT SIGNAL 1..21
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 22..590
FT /note="SID1 transmembrane family member 1"
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5002936133"
FT TRANSMEM 266..293
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 406..426
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 456..474
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 505..525
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 537..555
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT REGION 306..358
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 313..327
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 328..358
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 590 AA; 66041 MW; B64B3300569C85D6 CRC64;
MARGWRCLLA ATVLSWTFVL ATSVSETGTQ PVSAVHANFS LTYNGTVGSG GEVTYIFTYQ
EPPNTTEAVR LHVTSPDATE SHPLLVVVRQ EDGILSWQIP LRIERTLCPA EVEENQLQAD
VSKTVYVQLT SSAAANVSYS LMVTKVVDFD FRYNNTMDIE VSPAEPQYFS FSFPDQVDTV
VVRATSQNNE KCSVLSLQRA KCPVYDLDSN IEFSGIFQTF TSSAAITVQR EHFPDGKFYL
VVGVKPIEFE CTGKASMIQP ITEADFVTAV LAALAIFGLF YVVSGLVILG TWFRDSRNGN
LDREMESIED SFPPENKSLT ENGKSSYGAT GDEEHSDGKQ RETTPKDTDA ETPRKESVDI
STYDTLDDID TEKEIYRTKR VLYVADLARK EDKRLSKKFR LYNRNLITIA VFYALPVMQL
VFTYQVMMNR TGDQDLCYYN FLCIHPYGVL SAFNNVWSNI GFVMLGFLLM LLVYRRDRMH
KKQVETGGIH AKLAQEYGLP KHFGLYYAIA LALVMEGIMS ACYHVCPNYS NFQFEDLVAL
GSPGVTISMP NLAWTPDRHR TARRRTPGLK RSANPSLHVA GLQARAATPS
//
