ID C3Z4D8_BRAFL Unreviewed; 2582 AA.
AC C3Z4D8;
DT 28-JUL-2009, integrated into UniProtKB/TrEMBL.
DT 28-JUL-2009, sequence version 1.
DT 27-MAR-2024, entry version 61.
DE RecName: Full=MYND-type domain-containing protein {ECO:0000259|PROSITE:PS50865};
GN ORFNames=BRAFLDRAFT_101711 {ECO:0000313|EMBL:EEN52751.1};
OS Branchiostoma floridae (Florida lancelet) (Amphioxus).
OC Eukaryota; Metazoa; Chordata; Cephalochordata; Leptocardii; Amphioxiformes;
OC Branchiostomatidae; Branchiostoma.
OX NCBI_TaxID=7739;
RN [1] {ECO:0000313|EMBL:EEN52751.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=S238N-H82 {ECO:0000313|EMBL:EEN52751.1};
RC TISSUE=Testes {ECO:0000313|EMBL:EEN52751.1};
RX PubMed=18563158; DOI=10.1038/nature06967;
RG US DOE Joint Genome Institute (JGI-PGF);
RA Putnam N.H., Butts T., Ferrier D.E.K., Furlong R.F., Hellsten U.,
RA Kawashima T., Robinson-Rechavi M., Shoguchi E., Terry A., Yu J.-K.,
RA Benito-Gutierrez E.L., Dubchak I., Garcia-Fernandez J., Gibson-Brown J.J.,
RA Grigoriev I.V., Horton A.C., de Jong P.J., Jurka J., Kapitonov V.V.,
RA Kohara Y., Kuroki Y., Lindquist E., Lucas S., Osoegawa K., Pennacchio L.A.,
RA Salamov A.A., Satou Y., Sauka-Spengler T., Schmutz J., Shin-I T.,
RA Toyoda A., Bronner-Fraser M., Fujiyama A., Holland L.Z., Holland P.W.H.,
RA Satoh N., Rokhsar D.S.;
RT "The amphioxus genome and the evolution of the chordate karyotype.";
RL Nature 453:1064-1071(2008).
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DR EMBL; GG666578; EEN52751.1; -; Genomic_DNA.
DR RefSeq; XP_002596739.1; XM_002596693.1.
DR STRING; 7739.C3Z4D8; -.
DR eggNOG; ENOG502SG8R; Eukaryota.
DR InParanoid; C3Z4D8; -.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; IBA:GO_Central.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR Gene3D; 6.10.140.2220; -; 1.
DR InterPro; IPR002893; Znf_MYND.
DR PANTHER; PTHR10237:SF13; DEFORMED EPIDERMAL AUTOREGULATORY FACTOR 1 HOMOLOG; 1.
DR PANTHER; PTHR10237; DEFORMED EPIDERMAL AUTOREGULATORY FACTOR 1 HOMOLOG SUPPRESSIN; 1.
DR Pfam; PF01753; zf-MYND; 1.
DR SUPFAM; SSF144232; HIT/MYND zinc finger-like; 1.
DR PROSITE; PS50865; ZF_MYND_2; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00134}.
FT DOMAIN 2545..2581
FT /note="MYND-type"
FT /evidence="ECO:0000259|PROSITE:PS50865"
FT REGION 1..45
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 161..207
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 230..332
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 346..593
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 608..650
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 692..730
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 744..769
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 894..922
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1000..1023
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1068..1579
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1596..1903
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 2035..2077
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 2507..2532
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 14..30
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 161..183
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 244..267
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 274..325
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 369..388
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 404..421
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 442..464
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 479..494
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 495..509
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 510..538
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 539..581
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 612..650
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 703..721
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 894..913
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1102..1124
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1135..1206
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1278..1303
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1320..1334
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1345..1365
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1405..1421
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1422..1454
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1461..1477
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1478..1494
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1513..1550
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1562..1576
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1621..1639
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1655..1723
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1734..1748
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1749..1764
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1799..1818
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1829..1877
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1881..1901
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 2057..2077
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 2582 AA; 280498 MW; CCE1E6B8AA990E51 CRC64;
MAMFKKRISE ESPAPEPQWS SEQIKTSASV RPNLGEFGRK PQGGFADDVV TTSIHWVSFE
DLPNKATTDV AVGESKLKWP SWKKGSAKFS KALSSPTLRD RPEPDLTGRI SSICRPLSAY
GSVRNMDRSI VTATVGYQTD KPSVEGTEHI NSIEDRITFH NDSIDSGHEG NFDEEDEEHN
NHQFSTKQCF STEDNDSKCT DGRRPHLTQQ VPDEMNLEGF PDQQAGLAVG IGDRNKDKGD
TDGISPTRST ASNSSSSQGS DSRRQPKGEC NSILHHGSRS NEKSGIDQTV GSAHTKTNPS
CKSSEGTSFK EMRQYDSYSN EEMNSCESRD SIRSKEDYAL FAQEASIREG KKDTEAAISS
PKGGGLDQQA SRCHDERRSL EDEGYLAAEH LSQEGAANGD HVGRHSRITQ QACSTSDGEK
FLQERASLEE IPGADQPMHP SPPMEKEAEE ESEYCQCAFN ETDDDHEVEA AEADNSSDDD
TVSIEHRTES LQKRETSSVR QMTNTTDDDS CPIVEREDAT FQHRTQERIG DERSQKSRNS
SEALNADRQE QMFPSQMTSP STFGSPPRLL SSGNPAKQPN SPRRRGSPRI DQIADKLLKN
AVVLVERLPR SITDKASQKV KGRDSPKIDT PKAESMDTPK AESMDTTKAE SMDIAKAESM
PMGNSTNQVV DIAPTSRVSV ASRNISDDLP TVAACSSKEL REPPAAPPKK RDMKKLLPKP
PEPQRYTDGM YPYVPNAAAI PLYPSAHGPV SQQSMPPPPP NGLQYQYAPH GAQYPLGSLQ
HYHDNGAHQR FYAPYPGVRP RYLPPPNATA GIRNATYPDA LQTSSSQPLQ QPNPSLVVRI
REVGPESMLV AQNRALGGQQ QQQDNVAPIY HRQQGAMGSS TAMHQRPRIP YHANESSSLQ
ESRQGTTASQ APLAAETRKP PSLIDAVIDE MYERDESTVA QETSAWRLGK SSANRTERPV
VPEVFVSPPA RRLKENREVK SAMNLVDKMI EDAYFSSKPV EQNTDVPPEK EVRPFGHSRY
SPPLTVSMSD SRLSVHSTPP AHPKDFMSAL VARVVDEEYA KDDIVAAVPE GSLHDRQLQD
NGSPYHPNLP GPMAKPQERP TANQKHTNDR CKLTDTRSDS HSSPEGHHGL SNAVDETVQD
GQGREVKSNT DAVESTASDT QGTKADQVTA IPSPRNVNSE IPSESLPLEN LHSSDSSITG
SETQRPDLEA ISPPHVDNYT YENGHRCVAG RAEPESEPLM PSQENQDGKE CAAAPHVTNN
GLSTEEKPLL GNDASPCEED ASSPSKTAGD STSNEQSLRS SDEESSAVSK DLPRGSTAEV
DSKTADQLSS PCTELAEATD LIVDEETASN DRDNADEDLG ERSRSGSEVE GLAAAPNEQT
GSGEVRGEPT SSALTDERDK SGPKRAGKLK GRKRVVEGRH KKSMTRVKDK AESSAASEAR
IAHEFPRHNW LGEEEEEPSE VEGKDTIKSR SKHGTISRDS SMESCTSLDS LSSTGKPEGE
DDNVFPCPTS PDTVEKSIPT SPDQQEVSEP KSLTVAENLT EDSANADNSR GSGDEGLPIT
ERAAITSTTA RHSQEEPLNL SLKAARFVDF YNSVGSKNAT KAPEGTQKQG DAAGAPATAE
HVNHDTEHPA DDGENDKHTK SPGVSPPTLL QDSGVKKDPS ASPTAGRTSV APSPKPTTHF
TRESRSSHTP ITVTVHTKAK TSTTRHASDS IRSSSSSSSE NKPPREVPPA MGNVQDRPTS
QNSHSMFSFE DVPKDERATR QDGHQGIGPK RPASPTVRCP PRKRSTVDSG VVCVSPYSPV
SPSDKTTNSS PATITTTIHE ETPKRRTKSA ASLPETTTTT ATHHQFAVPS QQAVLPSKKS
ASQTLRSSSS GQERPSVISA VPVTPPLPPR PAAPPPQPND IPHRADQSVT AALLARLEVM
TKNKVNIERE LVNQELLLTE LRKRVAEDKS GLLRKQSQEK EALLFHMRMT YQKLCEDIDY
LMRSGPPKFG EGLKPLHAMA PNSKAPHSTG QPSQAIPIHR AQSDSAITLQ AGGKIGGEAN
RWRETTASER RSSDGESSSD VQIIGQKGPT ISNSLQDFRH VNPHIPPYLD PRYVADARQA
ALVYGNAGGQ QYSPTVSTAA KNHMSPRSGA PRFAPYAQTQ NDLAAATAAE RRRQAHMDVK
RAKQILNEHK SFVEKYSRPG EGNNPHNEVQ LNAPPANTAV PQAPVQGAVQ TSTIHPYPHG
VPIHQAVTMA QVMPILPGDP SLASRSAAVA HMVGPDQRPL PAIAHQGMHP FYYINPGMPI
PGYQQQPIPG QSPRVMNPVT QQLLSPPAGQ QIPTSTPNHQ LNNLRGAHRP PNITSTVSVN
SKEPPAAAQH HPVLLPGNPT PGQMCHHHHQ QQYGWPGQLV PNNAEMNAAY FAAHAAQHAA
KVQSRAEAAM KRGQSVKDHL QRPNVVALPE MQQAAYLSKH FKPFVTAPDG SIHPAKTHPA
HLQQARSQAK EHPRAVQQTA LEAAYLHDVQ LYHANNQSAS VFRGNPMMRG PPSVENGQGS
PSTMGPPRRD SGGIVSIADD EYHSCVVCNK EATFLCSGCR KAWYCSPTCQ VQAWEKHSED
CL
//
