ID C3ZM68_BRAFL Unreviewed; 779 AA.
AC C3ZM68;
DT 28-JUL-2009, integrated into UniProtKB/TrEMBL.
DT 28-JUL-2009, sequence version 1.
DT 27-MAR-2024, entry version 73.
DE RecName: Full=Ig-like domain-containing protein {ECO:0000259|PROSITE:PS50835};
GN ORFNames=BRAFLDRAFT_76566 {ECO:0000313|EMBL:EEN46324.1};
OS Branchiostoma floridae (Florida lancelet) (Amphioxus).
OC Eukaryota; Metazoa; Chordata; Cephalochordata; Leptocardii; Amphioxiformes;
OC Branchiostomatidae; Branchiostoma.
OX NCBI_TaxID=7739;
RN [1] {ECO:0000313|EMBL:EEN46324.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=S238N-H82 {ECO:0000313|EMBL:EEN46324.1};
RC TISSUE=Testes {ECO:0000313|EMBL:EEN46324.1};
RX PubMed=18563158; DOI=10.1038/nature06967;
RG US DOE Joint Genome Institute (JGI-PGF);
RA Putnam N.H., Butts T., Ferrier D.E.K., Furlong R.F., Hellsten U.,
RA Kawashima T., Robinson-Rechavi M., Shoguchi E., Terry A., Yu J.-K.,
RA Benito-Gutierrez E.L., Dubchak I., Garcia-Fernandez J., Gibson-Brown J.J.,
RA Grigoriev I.V., Horton A.C., de Jong P.J., Jurka J., Kapitonov V.V.,
RA Kohara Y., Kuroki Y., Lindquist E., Lucas S., Osoegawa K., Pennacchio L.A.,
RA Salamov A.A., Satou Y., Sauka-Spengler T., Schmutz J., Shin-I T.,
RA Toyoda A., Bronner-Fraser M., Fujiyama A., Holland L.Z., Holland P.W.H.,
RA Satoh N., Rokhsar D.S.;
RT "The amphioxus genome and the evolution of the chordate karyotype.";
RL Nature 453:1064-1071(2008).
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004479}; Single-
CC pass type I membrane protein {ECO:0000256|ARBA:ARBA00004479}.
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DR EMBL; GG666644; EEN46324.1; -; Genomic_DNA.
DR RefSeq; XP_002590313.1; XM_002590267.1.
DR AlphaFoldDB; C3ZM68; -.
DR eggNOG; KOG4475; Eukaryota.
DR InParanoid; C3ZM68; -.
DR GO; GO:0005911; C:cell-cell junction; IBA:GO_Central.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProt.
DR GO; GO:0050839; F:cell adhesion molecule binding; IBA:GO_Central.
DR GO; GO:0098609; P:cell-cell adhesion; IBA:GO_Central.
DR Gene3D; 2.60.40.10; Immunoglobulins; 5.
DR InterPro; IPR007110; Ig-like_dom.
DR InterPro; IPR036179; Ig-like_dom_sf.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR003599; Ig_sub.
DR InterPro; IPR003598; Ig_sub2.
DR InterPro; IPR013106; Ig_V-set.
DR PANTHER; PTHR11640:SF31; IRREGULAR CHIASM C-ROUGHEST PROTEIN-LIKE PROTEIN; 1.
DR PANTHER; PTHR11640; NEPHRIN; 1.
DR Pfam; PF13927; Ig_3; 4.
DR Pfam; PF07686; V-set; 1.
DR SMART; SM00409; IG; 5.
DR SMART; SM00408; IGc2; 5.
DR SUPFAM; SSF48726; Immunoglobulin; 5.
DR PROSITE; PS50835; IG_LIKE; 5.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius}; Signal {ECO:0000256|SAM:SignalP};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT SIGNAL 1..19
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 20..779
FT /note="Ig-like domain-containing protein"
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5002937016"
FT TRANSMEM 611..635
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 126..223
FT /note="Ig-like"
FT /evidence="ECO:0000259|PROSITE:PS50835"
FT DOMAIN 229..307
FT /note="Ig-like"
FT /evidence="ECO:0000259|PROSITE:PS50835"
FT DOMAIN 329..413
FT /note="Ig-like"
FT /evidence="ECO:0000259|PROSITE:PS50835"
FT DOMAIN 418..492
FT /note="Ig-like"
FT /evidence="ECO:0000259|PROSITE:PS50835"
FT DOMAIN 503..605
FT /note="Ig-like"
FT /evidence="ECO:0000259|PROSITE:PS50835"
FT REGION 737..761
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 779 AA; 85917 MW; 50293C306B49A976 CRC64;
MRTLLALVAV ALLASVCSAQ DPPPPEDTPE QLAIWDVLIK AYNRVVEEQQ ARGVKFELGA
ILDRLRPAIE THTGRSGTGE GNRDALTEFL SQHIDNFAER AQRSDDVKGD LIALLEERGQ
AQTDAARYRV APKSTAVLQG QRVTLQCAID NLSSRAVVSW MGPPDFQIIA NGDVVNPDYP
RYRITGDHSR GVYNLQISDT KLSDQGNYRC STFGLKPAQA TLTVVVPLPR PPSISGGQTP
VISSQRLILT CTCTGGHPPP QVTWYNGSRE VDPAYVSTET SGTRIVQTLT IEAVSKWDNG
ANLSCTADQR FPNLVKPKTS FRILRIHYPP TVNVPKSSIH VKEGMPTNLT CAVDSNPQAM
ITWEKLGHPF PIRGDERKPT LNLPKVTRYD GGTYQCTADN GVAPSGRGTI TLSVLYRPWI
DPTMEKKVTI LNGQDNFSLE CLADGNPKPR IRWRRKDTSL YWENPLRFHR VRYDIEGTYE
CVATTKDFPE VTKETFIDVV GRPQIREETS DVISSTEGEA TSLTCDVRAD PLPTKITWLW
RDTQGVEVEL SHVQGDTSVK ESSSKDEKSS SLTLKNVAIS NGGTYVCHAA NMFGTAQREI
HLNVTESYRS LATVIAITIA AMIVLAGLVI GLLLARRRGW ICGGLRTDDK NMSAPRPMPP
VPKYAHKTGT IDSGVEDLEL HEMEGTLKPR PPPRVDKDWT AIGLTYTGLA HPSTLPPYST
VERHRPDGED LQGDGIFHEP LGHPHPPTRH SHGRLTLGGK RATARRTQLD NVINEQQSL
//
