GenomeNet

Database: UniProt
Entry: C3ZRV0_BRAFL
LinkDB: C3ZRV0_BRAFL
Original site: C3ZRV0_BRAFL 
ID   C3ZRV0_BRAFL            Unreviewed;       902 AA.
AC   C3ZRV0;
DT   28-JUL-2009, integrated into UniProtKB/TrEMBL.
DT   28-JUL-2009, sequence version 1.
DT   27-MAR-2024, entry version 59.
DE   RecName: Full=F5/8 type C domain-containing protein {ECO:0000259|PROSITE:PS50022};
GN   ORFNames=BRAFLDRAFT_100183 {ECO:0000313|EMBL:EEN44750.1};
OS   Branchiostoma floridae (Florida lancelet) (Amphioxus).
OC   Eukaryota; Metazoa; Chordata; Cephalochordata; Leptocardii; Amphioxiformes;
OC   Branchiostomatidae; Branchiostoma.
OX   NCBI_TaxID=7739;
RN   [1] {ECO:0000313|EMBL:EEN44750.1}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=S238N-H82 {ECO:0000313|EMBL:EEN44750.1};
RC   TISSUE=Testes {ECO:0000313|EMBL:EEN44750.1};
RX   PubMed=18563158; DOI=10.1038/nature06967;
RG   US DOE Joint Genome Institute (JGI-PGF);
RA   Putnam N.H., Butts T., Ferrier D.E.K., Furlong R.F., Hellsten U.,
RA   Kawashima T., Robinson-Rechavi M., Shoguchi E., Terry A., Yu J.-K.,
RA   Benito-Gutierrez E.L., Dubchak I., Garcia-Fernandez J., Gibson-Brown J.J.,
RA   Grigoriev I.V., Horton A.C., de Jong P.J., Jurka J., Kapitonov V.V.,
RA   Kohara Y., Kuroki Y., Lindquist E., Lucas S., Osoegawa K., Pennacchio L.A.,
RA   Salamov A.A., Satou Y., Sauka-Spengler T., Schmutz J., Shin-I T.,
RA   Toyoda A., Bronner-Fraser M., Fujiyama A., Holland L.Z., Holland P.W.H.,
RA   Satoh N., Rokhsar D.S.;
RT   "The amphioxus genome and the evolution of the chordate karyotype.";
RL   Nature 453:1064-1071(2008).
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DR   EMBL; GG666667; EEN44750.1; -; Genomic_DNA.
DR   RefSeq; XP_002588739.1; XM_002588693.1.
DR   AlphaFoldDB; C3ZRV0; -.
DR   eggNOG; ENOG502QSUG; Eukaryota.
DR   InParanoid; C3ZRV0; -.
DR   GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR   CDD; cd10909; ChtBD1_GH18_2; 1.
DR   CDD; cd00057; FA58C; 1.
DR   Gene3D; 2.60.120.260; Galactose-binding domain-like; 1.
DR   InterPro; IPR000421; FA58C.
DR   InterPro; IPR008979; Galactose-bd-like_sf.
DR   PANTHER; PTHR20003; GLYCOPROTEIN-RELATED; 1.
DR   PANTHER; PTHR20003:SF4; PROLINE-RICH PROTEIN BSTNI SUBFAMILY 3; 1.
DR   Pfam; PF00754; F5_F8_type_C; 1.
DR   SMART; SM00231; FA58C; 1.
DR   SUPFAM; SSF49785; Galactose-binding domain-like; 1.
DR   PROSITE; PS50022; FA58C_3; 1.
PE   4: Predicted;
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM        353..375
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   DOMAIN          616..764
FT                   /note="F5/8 type C"
FT                   /evidence="ECO:0000259|PROSITE:PS50022"
FT   REGION          112..140
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          153..191
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          306..329
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          498..520
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        112..138
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        162..191
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        313..327
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   902 AA;  100915 MW;  590B2169F2222A9F CRC64;
     MAEDIIAQDN VPTVDTSDVT EVGLTQVISN PSKQKYLDPY TLSNVLPNPM YETTSENVAD
     RSVPVEDSTA VPETRYLQNT YEKMDNHGNY DNNGHHPIHT GCNEHVDGNH MPDGDHMPDG
     DHMPDGDHMP DGNHMPDTTE AADDTTQAIK IADDDHKPTS EPSVFQNDTK ASKSNIHPTS
     PQMIQDPNPL CSPKNDHNTI RDTTWPAEAL EQPNSGYTTS IRSCISSNKP YAAKDETKTT
     NNDDYATNVI LPNDIEDVIQ ETTNTDDDDD DLDPYMPYAV AYEFPNPTYR SECNSTEQDA
     DKVVRGNDNT EVPKNRHITS TDPSSMRDGL RRNPMYVPNA PQQARCQCTF KKVGIVVIVT
     AILVASILFG TWNYFNNNVR DVQKTVKAVY NTSNPGQPAL DSTYTHGQPA LDSTYTHGQP
     ALDSTYTHGQ TALDTTYTHG RFSADTTFTH DQLAVDITFS MDVPVADTTY IPGLTAAGTT
     YTHDHLVADT TYTHGQSALG TPSIHGQPAV DTTYTNGHPA SDTISVPHTL SHIAINIFGH
     KKHDIAGFML KKSQVGSPYK WEDVLPQTDV QRGTDKRQEF GGFQETARYW KIVVLPAHLG
     RSAIRELNLY GWPSDCSYPL GMESGAIRDS QISSSSSFVR HRNPRLNGNS EWRTDVINQN
     QWLQVDLQNR SIVSGIQTQG RRRDTARFVT SFTVSYSDDG TNWTVFTEGA NETKVFVGNN
     DSSTIQDNTF NPPIIARYIR VNPRTWNNCG FQRCITMRIE LLGCDLDGEP PEKKWRDVPP
     KKWRDDLRCG RRYPADDGNP AECDPDSVTP CCSDGDWCGN TTYHCNCHRC VDYRKKKNKK
     NKHPREILFP PNITTFREQF LPLMVLFQSG KLTPVRSDQS YNVNLVTRTN LILLSKNHPP
     LI
//
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