ID C3ZYN4_BRAFL Unreviewed; 547 AA.
AC C3ZYN4;
DT 28-JUL-2009, integrated into UniProtKB/TrEMBL.
DT 28-JUL-2009, sequence version 1.
DT 27-MAR-2024, entry version 65.
DE RecName: Full=LRRCT domain-containing protein {ECO:0000259|SMART:SM00082};
GN ORFNames=BRAFLDRAFT_108980 {ECO:0000313|EMBL:EEN42336.1};
OS Branchiostoma floridae (Florida lancelet) (Amphioxus).
OC Eukaryota; Metazoa; Chordata; Cephalochordata; Leptocardii; Amphioxiformes;
OC Branchiostomatidae; Branchiostoma.
OX NCBI_TaxID=7739;
RN [1] {ECO:0000313|EMBL:EEN42336.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=S238N-H82 {ECO:0000313|EMBL:EEN42336.1};
RC TISSUE=Testes {ECO:0000313|EMBL:EEN42336.1};
RX PubMed=18563158; DOI=10.1038/nature06967;
RG US DOE Joint Genome Institute (JGI-PGF);
RA Putnam N.H., Butts T., Ferrier D.E.K., Furlong R.F., Hellsten U.,
RA Kawashima T., Robinson-Rechavi M., Shoguchi E., Terry A., Yu J.-K.,
RA Benito-Gutierrez E.L., Dubchak I., Garcia-Fernandez J., Gibson-Brown J.J.,
RA Grigoriev I.V., Horton A.C., de Jong P.J., Jurka J., Kapitonov V.V.,
RA Kohara Y., Kuroki Y., Lindquist E., Lucas S., Osoegawa K., Pennacchio L.A.,
RA Salamov A.A., Satou Y., Sauka-Spengler T., Schmutz J., Shin-I T.,
RA Toyoda A., Bronner-Fraser M., Fujiyama A., Holland L.Z., Holland P.W.H.,
RA Satoh N., Rokhsar D.S.;
RT "The amphioxus genome and the evolution of the chordate karyotype.";
RL Nature 453:1064-1071(2008).
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DR EMBL; GG666733; EEN42336.1; -; Genomic_DNA.
DR RefSeq; XP_002586325.1; XM_002586279.1.
DR AlphaFoldDB; C3ZYN4; -.
DR eggNOG; KOG0619; Eukaryota.
DR InParanoid; C3ZYN4; -.
DR GO; GO:0031012; C:extracellular matrix; IBA:GO_Central.
DR GO; GO:0005615; C:extracellular space; IBA:GO_Central.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR Gene3D; 3.80.10.10; Ribonuclease Inhibitor; 2.
DR InterPro; IPR000483; Cys-rich_flank_reg_C.
DR InterPro; IPR001611; Leu-rich_rpt.
DR InterPro; IPR003591; Leu-rich_rpt_typical-subtyp.
DR InterPro; IPR026906; LRR_5.
DR InterPro; IPR032675; LRR_dom_sf.
DR PANTHER; PTHR24373:SF279; IG-LIKE DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR24373; SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN; 1.
DR Pfam; PF13306; LRR_5; 1.
DR Pfam; PF13855; LRR_8; 1.
DR SMART; SM00369; LRR_TYP; 7.
DR SMART; SM00082; LRRCT; 1.
DR SUPFAM; SSF52058; L domain-like; 1.
DR PROSITE; PS51450; LRR; 2.
PE 4: Predicted;
KW Leucine-rich repeat {ECO:0000256|ARBA:ARBA00022614};
KW Membrane {ECO:0000256|SAM:Phobius}; Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Signal {ECO:0000256|ARBA:ARBA00022729, ECO:0000256|SAM:SignalP};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT SIGNAL 1..26
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 27..547
FT /note="LRRCT domain-containing protein"
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5002935344"
FT TRANSMEM 425..449
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 230..280
FT /note="LRRCT"
FT /evidence="ECO:0000259|SMART:SM00082"
FT REGION 306..408
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 489..547
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 306..406
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 489..504
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 547 AA; 58761 MW; 840DF1039034451C CRC64;
MHMANKMKHL LVLLLIILKE TRPTTACSSS CSLSSCNCRD KGLNSVPQFL PTNIIYLNLY
GNEITILRPY DFSRYKALLT LHLAANQISS ISSTAFYNLT NLHGLRLFAN RLTSLQVHMF
EGLDNLEILD LHHNGMTSIE EGTFNSTPKL HTLDLRHNSI STIAPDTFSN LPQLSSLDLS
SNRMNTFPVG LFSNLSTVSN LDIENNQMET LPPEAYDILA SISTSNLGSN PWQCDCRMLP
FKQRMTGSYL FEYTITCAGP GSFQGKSLLQ DVNPEDLICE ETTASPSPST STPVVQPRVF
TSLLSTSFKT PSTTNNTVST PGPSVSTPGL STVSPSPTDI VEKSTSTVQQ SSTPPMASET
HIADSTPYLS TVSTSSSSEP TESPQSSTSP RPNSASTASA STHVLPEMTE SKPGPSFVWF
SLPSFLNGLL GAAVLLAGLL VIRAIFFTIR CIHKRRTREA PSSQNSTVSF ANTNLPAAVT
TVGGHVQTGQ DRSSIATSTE GYSDVIPTFP PPPPTAGAGS QAGYQNVSAA AHGADANARH
QYEALTR
//
