ID C4LD93_TOLAT Unreviewed; 355 AA.
AC C4LD93;
DT 07-JUL-2009, integrated into UniProtKB/TrEMBL.
DT 07-JUL-2009, sequence version 1.
DT 27-MAR-2024, entry version 62.
DE SubName: Full=Helix-turn-helix domain protein {ECO:0000313|EMBL:ACQ94624.1};
GN OrderedLocusNames=Tola_3035 {ECO:0000313|EMBL:ACQ94624.1};
OS Tolumonas auensis (strain DSM 9187 / TA4).
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Aeromonadales;
OC Aeromonadaceae; Tolumonas.
OX NCBI_TaxID=595494 {ECO:0000313|EMBL:ACQ94624.1, ECO:0000313|Proteomes:UP000009073};
RN [1] {ECO:0000313|Proteomes:UP000009073}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 9187 / TA4 {ECO:0000313|Proteomes:UP000009073};
RG US DOE Joint Genome Institute;
RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D.,
RA Goodwin L., Pitluck S., Chertkov O., Brettin T., Detter J.C., Han C.,
RA Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Spring S.,
RA Beller H.;
RT "Complete sequence of Tolumonas auensis DSM 9187.";
RL Submitted (MAY-2009) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:ACQ94624.1, ECO:0000313|Proteomes:UP000009073}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 9187 / TA4 {ECO:0000313|Proteomes:UP000009073};
RX PubMed=22180815; DOI=10.4056/sigs.2184986;
RA Chertkov O., Copeland A., Lucas S., Lapidus A., Berry K.W., Detter J.C.,
RA Del Rio T.G., Hammon N., Dalin E., Tice H., Pitluck S., Richardson P.,
RA Bruce D., Goodwin L., Han C., Tapia R., Saunders E., Schmutz J.,
RA Brettin T., Larimer F., Land M., Hauser L., Spring S., Rohde M.,
RA Kyrpides N.C., Ivanova N., Goker M., Beller H.R., Klenk H.P., Woyke T.;
RT "Complete genome sequence of Tolumonas auensis type strain (TA 4).";
RL Stand. Genomic Sci. 5:112-120(2011).
CC -!- SIMILARITY: Belongs to the short-chain fatty acyl-CoA assimilation
CC regulator (ScfR) family. {ECO:0000256|ARBA:ARBA00007227}.
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DR EMBL; CP001616; ACQ94624.1; -; Genomic_DNA.
DR RefSeq; WP_015880073.1; NC_012691.1.
DR AlphaFoldDB; C4LD93; -.
DR STRING; 595494.Tola_3035; -.
DR KEGG; tau:Tola_3035; -.
DR eggNOG; COG1396; Bacteria.
DR eggNOG; COG2856; Bacteria.
DR HOGENOM; CLU_053651_0_0_6; -.
DR OrthoDB; 9794834at2; -.
DR Proteomes; UP000009073; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR CDD; cd00093; HTH_XRE; 1.
DR Gene3D; 1.10.10.2910; -; 1.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR InterPro; IPR001387; Cro/C1-type_HTH.
DR InterPro; IPR010359; IrrE_HExxH.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR PANTHER; PTHR43236; ANTITOXIN HIGA1; 1.
DR PANTHER; PTHR43236:SF1; BLL7220 PROTEIN; 1.
DR Pfam; PF01381; HTH_3; 1.
DR Pfam; PF06114; Peptidase_M78; 1.
DR SMART; SM00530; HTH_XRE; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR PROSITE; PS50943; HTH_CROC1; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000009073}.
FT DOMAIN 6..60
FT /note="HTH cro/C1-type"
FT /evidence="ECO:0000259|PROSITE:PS50943"
SQ SEQUENCE 355 AA; 39981 MW; D77B4DB702C37FB8 CRC64;
MIGERLLRAR AAAGLSMKAL GDLVGVSANM IKKYEHNQNM PSSGVMIKLA KVLSVRSEYF
FRPVKVELAG VEFRKRANTP ASVLKKLEAD VLDQAERWQE LANLWPTFPV PKFSVPQNLP
GKITSLDEIE TFANQVRSAW DLGGKPVLDL IDVLESQGIL VIITQVDESA KFDGLQATVA
DQPVIVLSAN WPGDRQRFTL AHELGHLLLH GRLSAELNEE KACNRFAGSF LLPANAIRQQ
LGITRHTIEF RELFFLKHEF GLSMRACLYR ACDLGIITES IHKLLSMQFS YRGWRKCEPG
RVYPQEETRL FQQLIYRGLG ENILSESKAA ELLGISLMTF HRQRKLELVD AAINQ
//
