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Database: UniProt
Entry: C4LJF2_CORK4
LinkDB: C4LJF2_CORK4
Original site: C4LJF2_CORK4 
ID   C4LJF2_CORK4            Unreviewed;       250 AA.
AC   C4LJF2;
DT   07-JUL-2009, integrated into UniProtKB/TrEMBL.
DT   07-JUL-2009, sequence version 1.
DT   24-JAN-2024, entry version 78.
DE   SubName: Full=Transcriptional regulator, IclR family {ECO:0000313|EMBL:ACR17957.1};
GN   Name=ltbR {ECO:0000313|EMBL:ACR17957.1};
GN   OrderedLocusNames=ckrop_1212 {ECO:0000313|EMBL:ACR17957.1};
OS   Corynebacterium kroppenstedtii (strain DSM 44385 / JCM 11950 / CIP 105744 /
OS   CCUG 35717).
OC   Bacteria; Actinomycetota; Actinomycetes; Mycobacteriales;
OC   Corynebacteriaceae; Corynebacterium.
OX   NCBI_TaxID=645127 {ECO:0000313|EMBL:ACR17957.1, ECO:0000313|Proteomes:UP000001473};
RN   [1] {ECO:0000313|EMBL:ACR17957.1, ECO:0000313|Proteomes:UP000001473}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 44385 / JCM 11950 / CIP 105744 / CCUG 35717
RC   {ECO:0000313|Proteomes:UP000001473};
RX   PubMed=18430482; DOI=10.1016/j.jbiotec.2008.03.004;
RA   Tauch A., Schneider J., Szczepanowski R., Tilker A., Viehoever P.,
RA   Gartemann K.-H., Arnold W., Blom J., Brinkrolf K., Brune I., Goetker S.,
RA   Weisshaar B., Goesmann A., Droege M., Puehler A.;
RT   "Ultrafast pyrosequencing of Corynebacterium kroppenstedtii DSM44385
RT   revealed insights into the physiology of a lipophilic corynebacterium that
RT   lacks mycolic acids.";
RL   J. Biotechnol. 136:22-30(2008).
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DR   EMBL; CP001620; ACR17957.1; -; Genomic_DNA.
DR   AlphaFoldDB; C4LJF2; -.
DR   STRING; 645127.ckrop_1212; -.
DR   KEGG; ckp:ckrop_1212; -.
DR   eggNOG; COG1414; Bacteria.
DR   HOGENOM; CLU_062618_4_1_11; -.
DR   OMA; EPDRLHR; -.
DR   OrthoDB; 4319317at2; -.
DR   Proteomes; UP000001473; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR   Gene3D; 3.30.450.40; -; 1.
DR   Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR   InterPro; IPR029016; GAF-like_dom_sf.
DR   InterPro; IPR014757; Tscrpt_reg_IclR_C.
DR   InterPro; IPR005471; Tscrpt_reg_IclR_N.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   InterPro; IPR036390; WH_DNA-bd_sf.
DR   PANTHER; PTHR30136; HELIX-TURN-HELIX TRANSCRIPTIONAL REGULATOR, ICLR FAMILY; 1.
DR   PANTHER; PTHR30136:SF39; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR   Pfam; PF09339; HTH_IclR; 1.
DR   Pfam; PF01614; IclR; 1.
DR   SMART; SM00346; HTH_ICLR; 1.
DR   SUPFAM; SSF55781; GAF domain-like; 1.
DR   SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR   PROSITE; PS51077; HTH_ICLR; 1.
DR   PROSITE; PS51078; ICLR_ED; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000001473};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163};
KW   Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT   DOMAIN          24..83
FT                   /note="HTH iclR-type"
FT                   /evidence="ECO:0000259|PROSITE:PS51077"
FT   DOMAIN          84..250
FT                   /note="IclR-ED"
FT                   /evidence="ECO:0000259|PROSITE:PS51078"
SQ   SEQUENCE   250 AA;  27058 MW;  48FDB68FDE41CF4F CRC64;
     MGKLSDFDNE LDDNHATFNP DSGIKVLDRS LLILRTATAQ PMNLSEICSS TGLPRATAHR
     LLTALHVHRL LERDKDGRWR AGPGLSELSP ASSDRIIQAG MTVMRSLMEK TNESVQIYRL
     TGNVRTCIAS IEPASGLQNT VPVGARMSLL RGSAARVLMA WAPEELVQSI IPDAAFTEDD
     LAEIRTTGVA ESIGERDPSL ASVSTPIRAN QGVVAALSIS GPVERLRPSP QQLYGNLIRE
     AAKRINQSLQ
//
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