ID C4LJF2_CORK4 Unreviewed; 250 AA.
AC C4LJF2;
DT 07-JUL-2009, integrated into UniProtKB/TrEMBL.
DT 07-JUL-2009, sequence version 1.
DT 24-JAN-2024, entry version 78.
DE SubName: Full=Transcriptional regulator, IclR family {ECO:0000313|EMBL:ACR17957.1};
GN Name=ltbR {ECO:0000313|EMBL:ACR17957.1};
GN OrderedLocusNames=ckrop_1212 {ECO:0000313|EMBL:ACR17957.1};
OS Corynebacterium kroppenstedtii (strain DSM 44385 / JCM 11950 / CIP 105744 /
OS CCUG 35717).
OC Bacteria; Actinomycetota; Actinomycetes; Mycobacteriales;
OC Corynebacteriaceae; Corynebacterium.
OX NCBI_TaxID=645127 {ECO:0000313|EMBL:ACR17957.1, ECO:0000313|Proteomes:UP000001473};
RN [1] {ECO:0000313|EMBL:ACR17957.1, ECO:0000313|Proteomes:UP000001473}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 44385 / JCM 11950 / CIP 105744 / CCUG 35717
RC {ECO:0000313|Proteomes:UP000001473};
RX PubMed=18430482; DOI=10.1016/j.jbiotec.2008.03.004;
RA Tauch A., Schneider J., Szczepanowski R., Tilker A., Viehoever P.,
RA Gartemann K.-H., Arnold W., Blom J., Brinkrolf K., Brune I., Goetker S.,
RA Weisshaar B., Goesmann A., Droege M., Puehler A.;
RT "Ultrafast pyrosequencing of Corynebacterium kroppenstedtii DSM44385
RT revealed insights into the physiology of a lipophilic corynebacterium that
RT lacks mycolic acids.";
RL J. Biotechnol. 136:22-30(2008).
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DR EMBL; CP001620; ACR17957.1; -; Genomic_DNA.
DR AlphaFoldDB; C4LJF2; -.
DR STRING; 645127.ckrop_1212; -.
DR KEGG; ckp:ckrop_1212; -.
DR eggNOG; COG1414; Bacteria.
DR HOGENOM; CLU_062618_4_1_11; -.
DR OMA; EPDRLHR; -.
DR OrthoDB; 4319317at2; -.
DR Proteomes; UP000001473; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR014757; Tscrpt_reg_IclR_C.
DR InterPro; IPR005471; Tscrpt_reg_IclR_N.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR30136; HELIX-TURN-HELIX TRANSCRIPTIONAL REGULATOR, ICLR FAMILY; 1.
DR PANTHER; PTHR30136:SF39; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR Pfam; PF09339; HTH_IclR; 1.
DR Pfam; PF01614; IclR; 1.
DR SMART; SM00346; HTH_ICLR; 1.
DR SUPFAM; SSF55781; GAF domain-like; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS51077; HTH_ICLR; 1.
DR PROSITE; PS51078; ICLR_ED; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000001473};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 24..83
FT /note="HTH iclR-type"
FT /evidence="ECO:0000259|PROSITE:PS51077"
FT DOMAIN 84..250
FT /note="IclR-ED"
FT /evidence="ECO:0000259|PROSITE:PS51078"
SQ SEQUENCE 250 AA; 27058 MW; 48FDB68FDE41CF4F CRC64;
MGKLSDFDNE LDDNHATFNP DSGIKVLDRS LLILRTATAQ PMNLSEICSS TGLPRATAHR
LLTALHVHRL LERDKDGRWR AGPGLSELSP ASSDRIIQAG MTVMRSLMEK TNESVQIYRL
TGNVRTCIAS IEPASGLQNT VPVGARMSLL RGSAARVLMA WAPEELVQSI IPDAAFTEDD
LAEIRTTGVA ESIGERDPSL ASVSTPIRAN QGVVAALSIS GPVERLRPSP QQLYGNLIRE
AAKRINQSLQ
//