ID C5DG60_LACTC Unreviewed; 462 AA.
AC C5DG60;
DT 28-JUL-2009, integrated into UniProtKB/TrEMBL.
DT 28-JUL-2009, sequence version 1.
DT 24-JAN-2024, entry version 67.
DE RecName: Full=Nucleolar protein 12 {ECO:0000256|ARBA:ARBA00015520};
GN OrderedLocusNames=KLTH0D02640g {ECO:0000313|EMBL:CAR22402.1};
OS Lachancea thermotolerans (strain ATCC 56472 / CBS 6340 / NRRL Y-8284)
OS (Yeast) (Kluyveromyces thermotolerans).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes;
OC Saccharomycetales; Saccharomycetaceae; Lachancea.
OX NCBI_TaxID=559295 {ECO:0000313|EMBL:CAR22402.1, ECO:0000313|Proteomes:UP000002036};
RN [1] {ECO:0000313|EMBL:CAR22402.1, ECO:0000313|Proteomes:UP000002036}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 56472 / CBS 6340 / NRRL Y-8284
RC {ECO:0000313|Proteomes:UP000002036};
RX PubMed=19525356; DOI=10.1101/gr.091546.109;
RG The Genolevures Consortium;
RA Souciet J.-L., Dujon B., Gaillardin C., Johnston M., Baret P.V.,
RA Cliften P., Sherman D.J., Weissenbach J., Westhof E., Wincker P., Jubin C.,
RA Poulain J., Barbe V., Segurens B., Artiguenave F., Anthouard V.,
RA Vacherie B., Val M.-E., Fulton R.S., Minx P., Wilson R., Durrens P.,
RA Jean G., Marck C., Martin T., Nikolski M., Rolland T., Seret M.-L.,
RA Casaregola S., Despons L., Fairhead C., Fischer G., Lafontaine I., Leh V.,
RA Lemaire M., de Montigny J., Neuveglise C., Thierry A., Blanc-Lenfle I.,
RA Bleykasten C., Diffels J., Fritsch E., Frangeul L., Goeffon A.,
RA Jauniaux N., Kachouri-Lafond R., Payen C., Potier S., Pribylova L.,
RA Ozanne C., Richard G.-F., Sacerdot C., Straub M.-L., Talla E.;
RT "Comparative genomics of protoploid Saccharomycetaceae.";
RL Genome Res. 19:1696-1709(2009).
CC -!- FUNCTION: Involved in pre-25S rRNA processing.
CC {ECO:0000256|ARBA:ARBA00002475}.
CC -!- SIMILARITY: Belongs to the RRM RBM34 family.
CC {ECO:0000256|ARBA:ARBA00007077}.
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DR EMBL; CU928168; CAR22402.1; -; Genomic_DNA.
DR RefSeq; XP_002552840.1; XM_002552794.1.
DR AlphaFoldDB; C5DG60; -.
DR STRING; 559295.C5DG60; -.
DR GeneID; 8295060; -.
DR KEGG; lth:KLTH0D02640g; -.
DR eggNOG; KOG0118; Eukaryota.
DR HOGENOM; CLU_006468_0_0_1; -.
DR InParanoid; C5DG60; -.
DR OMA; NAYAVYT; -.
DR OrthoDB; 36980at2759; -.
DR Proteomes; UP000002036; Chromosome D.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR Gene3D; 3.30.70.330; -; 2.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR PANTHER; PTHR23236; EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H; 1.
DR PANTHER; PTHR23236:SF25; RNA-BINDING PROTEIN 34; 1.
DR Pfam; PF00076; RRM_1; 1.
DR SMART; SM00360; RRM; 2.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 2.
DR PROSITE; PS50102; RRM; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000002036};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00176}.
FT DOMAIN 297..376
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT REGION 40..163
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 375..398
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 427..462
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 76..144
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 431..449
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 462 AA; 50611 MW; E5FB689908122A6D CRC64;
MGSIDKLFGP AASKVESGLS KLFGSSAGPV DVAKVKSKIR TVLPGVEPEA KPETKEASAE
ASTEQGSQGE GESGSEEGAK PAKRGLEAEE APAQPKKLSK RQKRKALDAD NENLESEYYS
KLLEKEQGEA EETSAAEPES KDGEAEASVQ ATAASASRKD LKEEELQKAE RTVFVGNVPV
DVVTSKPLKK QFKKLFAVAK KHSGGDDSDE DKATGPDTFA VESIRFRSIS FEEALPRKVA
FVQQKLHKSR DSANAYVVYA EKAAVKAACQ TLNGTVFYDH HLRVDSVAHP AQHDNKRSVF
VGNLDFEEAE ENLWKHFEKS GEIEYVRVVR DSKTNMGKGF AYVQFRDFQD INKALLLNDQ
KLNGTGRKLR VTRCKNMKKT QPSSQKHPKA LTDDQRTKLG RAKKVLGKAD RSTVGKDVTI
EGLRATKGAS TPILKKKKQR SKSGRVTKRS TAFKKANASN SR
//