ID   C5KCE2_PERM5            Unreviewed;      1976 AA.
AC   C5KCE2;
DT   28-JUL-2009, integrated into UniProtKB/TrEMBL.
DT   28-JUL-2009, sequence version 1.
DT   13-SEP-2023, entry version 54.
DE   RecName: Full=Chromo domain-containing protein {ECO:0008006|Google:ProtNLM};
GN   ORFNames=Pmar_PMAR023734 {ECO:0000313|EMBL:EER17804.1};
OS   Perkinsus marinus (strain ATCC 50983 / TXsc).
OC   Eukaryota; Sar; Alveolata; Perkinsozoa; Perkinsea; Perkinsida; Perkinsidae;
OC   Perkinsus.
OX   NCBI_TaxID=423536 {ECO:0000313|Proteomes:UP000007800};
RN   [1] {ECO:0000313|EMBL:EER17804.1, ECO:0000313|Proteomes:UP000007800}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 50983 / TXsc {ECO:0000313|Proteomes:UP000007800};
RA   El-Sayed N., Caler E., Inman J., Amedeo P., Hass B., Wortman J.;
RL   Submitted (JUL-2008) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; GG671995; EER17804.1; -; Genomic_DNA.
DR   RefSeq; XP_002786008.1; XM_002785962.1.
DR   EnsemblProtists; EER17804; EER17804; Pmar_PMAR023734.
DR   GeneID; 9087130; -.
DR   InParanoid; C5KCE2; -.
DR   OrthoDB; 217750at2759; -.
DR   Proteomes; UP000007800; Unassembled WGS sequence.
DR   GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR   CDD; cd00024; CD_CSD; 1.
DR   Gene3D; 2.40.50.40; -; 1.
DR   Gene3D; 3.30.1370.10; K Homology domain, type 1; 1.
DR   Gene3D; 1.10.720.30; SAP domain; 1.
DR   InterPro; IPR016197; Chromo-like_dom_sf.
DR   InterPro; IPR000953; Chromo/chromo_shadow_dom.
DR   InterPro; IPR036612; KH_dom_type_1_sf.
DR   InterPro; IPR003034; SAP_dom.
DR   InterPro; IPR036361; SAP_dom_sf.
DR   Pfam; PF02037; SAP; 1.
DR   SMART; SM00298; CHROMO; 1.
DR   SMART; SM00513; SAP; 1.
DR   SUPFAM; SSF54160; Chromo domain-like; 1.
DR   SUPFAM; SSF54791; Eukaryotic type KH-domain (KH-domain type I); 1.
DR   SUPFAM; SSF68906; SAP domain; 1.
DR   PROSITE; PS50013; CHROMO_2; 1.
DR   PROSITE; PS50800; SAP; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000007800}.
FT   DOMAIN          7..72
FT                   /note="Chromo"
FT                   /evidence="ECO:0000259|PROSITE:PS50013"
FT   DOMAIN          1738..1772
FT                   /note="SAP"
FT                   /evidence="ECO:0000259|PROSITE:PS50800"
FT   REGION          92..169
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1160..1196
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1608..1628
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1667..1711
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1906..1931
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1951..1976
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        113..128
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1167..1189
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   1976 AA;  219684 MW;  2B70697CBCAAD67F CRC64;
     MASPEYYEVQ ALLDVRKISG RKEEFLVKWK NSRELTWEPS GNIGSGLNDV KEVWYQLNDY
     YKHQHAQTLR QKKERFRGRK LTESVASPAG VVRKVYRKRS PSRSSSSGDD YTSHSESSDD
     DDLKEEPLNG AAGDYQTGKL NEDEKMKGYQ ASPSDTTMGG TNRAPAAPRP IPVARFRGGL
     FGMVDDLKQN AVLRVANTAG VRYLPETKLN KLFIEYLYGT DVESSVMSDL QYEQAVVDLM
     WSMAVNLQGL DEATLSDLKE CLLRLARQLR LQPATTSKML QDWFNRHHHV HATGSPSYNL
     MNVSTLRAIC SWMSTLTDEG ATKMEDFSDT GSVADVDVDA LLKGSDDVEM EEPIETVEDP
     IVAEFTQAQN EMFGETEDTD EGDICTLIHL VYAAKNPSKL SEMPGLIAKY SATLKALYES
     ICKKYGVDCA EFAIQSNIKN YRTMEDFAAY SLASARSLYA TYNPAKLDEI EDIMAKNANQ
     EMQVVAAIRQ KYDEGRGYKP GMYYPPSSPE YGIMELIREE LAVYNPDLLR SIEHTVFTQY
     RSRELYVYLA ICDKYGVTID EDRLAAVVET YREKQNTQRQ AQVFNVVKEI YKTYNRGKVK
     DIHRLVNKFS KSTSSELELI QAVCNKFRVP LHVKVDIISR MLDPGALDLT WHSKFQEAVE
     KSDLSMHVWG LIQMEMSSNM DSHLVSQPPM RLSGEDASML TMDRLSGEEQ WTTVEMLIRG
     RGGMISNEVI MRDLLDQKVH ELGINNYPSQ LRYRITQQEP ESVQWDSFWV AETPRLSCTL
     SMNSVSPPEP SAAGYRPQRL WLSMQDLLQW IHHIRQQYQV AADELAQSVL QKGGQEDGPV
     VQPPLTAKRE QPTQPLLSCN VALVSPKLTV FAGDYRTLII DEYPECSLNR QQNHVWFLPK
     GGRRSDIVDK LRAACAAWPR WLRHGGAVII DYDKVHFIGG LRRRAMYREG IKQISRLLGD
     EAGSVRIPRY LLSLPLGPLQ PQLQELVSDY DDHESQDDYG ESDPEVPTEL IRPLRLSRQQ
     MRDAFIQGAL CLNCDDITHK PADCGIRRKV CWNCHGAHQG HTCTTRCRFC QCNHSAFVLL
     ECVKRGGRRA QEWAKNRHYQ EQFQLNRTYL DVEQAIASAE AAGKQWSDEI VEMVRILYNA
     GQWLPNSWKE HFEKALADAN AVKSEEGGGQ DQASTADNEA SVSTGSIKPV LPSTPPPILP
     DQKYKWIERI FLDELLGAGM LGRDAVRAIV GSRGQNHKEM ESATQSRIYF RGMGMKDGSV
     GGGAEEMPDL RHFDTEARIH VLVKCDQPPQ ARAVRSMLIR IIRGLESERQ RGHGALPPLC
     DAFHWLESSS KYQSGMGKRE DMDRYSGGAD DGGARALPGG GIQGLEITLG DNRDKEVNAL
     QHWLHAQGIE AKTDSNLTRI LIPSTRKIEA SVAIKEREQP GEFDDKMEER KRIINSPAVR
     HSVYSSLFQL FALWPAQPPA VSGVYWFEPW QLEPIGLIGR IRATAPEGQP IEDDRFWMDV
     GQRCRLSMKG AEEVASLLEA MEELPDKVDK DMCVEILRTF VGSVQCAARD HRLLLYLRYP
     WAMVHTVGDD ELTALNLFPR NLSVHLINKE IRETGRLGTN TGDVTALKSS VKQQSVKSGD
     RPGDHLLERL SPDRVPEMEP PYIGFAVEWL LPDDVLLHTA AAAAAAGHAG GPAGGEVRAQ
     YGDEGEPPQR VPIAAPVAVP SPSPTEARPT TIKGEMGQDA VIVDDASDHA PQNQREEYMA
     MSVAQLREKL RAQGLPVTGR KTDLVDRLLK KPLGASQKTA QGPALYKCRV ELPAQLMGWH
     ELRNNLCGDR NAHFEHVHSQ CPGTKLSLAG NQSAALQGSA RLHVLVTTNG LEADYKRAKD
     LVVDLAKAVA EHGAEVMLGD LSPTQLESVL AEIKIVELTT SVPAAVPANT AGAGGDSEGS
     GGASQGAAGA GTSSAFNRLF GALQAAAAKG SQAPGSAAAP NAGTPTGRQA ASYEDL
//