ID C5LAT2_PERM5 Unreviewed; 258 AA.
AC C5LAT2;
DT 28-JUL-2009, integrated into UniProtKB/TrEMBL.
DT 28-JUL-2009, sequence version 1.
DT 27-MAR-2024, entry version 40.
DE SubName: Full=Exosome complex exonuclease RRP46, putative {ECO:0000313|EMBL:EER06159.1};
GN ORFNames=Pmar_PMAR008291 {ECO:0000313|EMBL:EER06159.1};
OS Perkinsus marinus (strain ATCC 50983 / TXsc).
OC Eukaryota; Sar; Alveolata; Perkinsozoa; Perkinsea; Perkinsida; Perkinsidae;
OC Perkinsus.
OX NCBI_TaxID=423536 {ECO:0000313|Proteomes:UP000007800};
RN [1] {ECO:0000313|EMBL:EER06159.1, ECO:0000313|Proteomes:UP000007800}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 50983 / TXsc {ECO:0000313|Proteomes:UP000007800};
RA El-Sayed N., Caler E., Inman J., Amedeo P., Hass B., Wortman J.;
RL Submitted (JUL-2008) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the RNase PH family.
CC {ECO:0000256|ARBA:ARBA00006678}.
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DR EMBL; GG680784; EER06159.1; -; Genomic_DNA.
DR RefSeq; XP_002774343.1; XM_002774297.1.
DR AlphaFoldDB; C5LAT2; -.
DR EnsemblProtists; EER06159; EER06159; Pmar_PMAR008291.
DR GeneID; 9065047; -.
DR InParanoid; C5LAT2; -.
DR OrthoDB; 2070785at2759; -.
DR Proteomes; UP000007800; Unassembled WGS sequence.
DR GO; GO:0000178; C:exosome (RNase complex); IEA:UniProtKB-KW.
DR GO; GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.
DR CDD; cd11372; RNase_PH_RRP46; 1.
DR Gene3D; 3.30.230.70; GHMP Kinase, N-terminal domain; 1.
DR InterPro; IPR001247; ExoRNase_PH_dom1.
DR InterPro; IPR027408; PNPase/RNase_PH_dom_sf.
DR InterPro; IPR020568; Ribosomal_Su5_D2-typ_SF.
DR PANTHER; PTHR11953; EXOSOME COMPLEX COMPONENT; 1.
DR PANTHER; PTHR11953:SF1; EXOSOME COMPLEX COMPONENT RRP46; 1.
DR Pfam; PF01138; RNase_PH; 1.
DR SUPFAM; SSF54211; Ribosomal protein S5 domain 2-like; 1.
PE 3: Inferred from homology;
KW Exonuclease {ECO:0000313|EMBL:EER06159.1};
KW Exosome {ECO:0000256|ARBA:ARBA00022835};
KW Hydrolase {ECO:0000313|EMBL:EER06159.1};
KW Nuclease {ECO:0000313|EMBL:EER06159.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000007800}.
FT DOMAIN 35..154
FT /note="Exoribonuclease phosphorolytic"
FT /evidence="ECO:0000259|Pfam:PF01138"
SQ SEQUENCE 258 AA; 27693 MW; F204B995E95277DE CRC64;
MSSAVEEVNP NKAEVAAPEF IYHQARIDGR ECSMMRPPTL ELGLLPQKDG SARLGFGDTE
VLVGVNGPVE NRFPLGVSTP GYPLDVTVRR ASGMPTAEDK SVEYQLTKFI NTIIDTHLLP
GNTMVTVAVE VMNNDGSLLS TIFNAAILAL LDAGSIPLRG TAFAAALGKR YHRGGTQILV
DPDQSEEESS VFTDTFVIDI HSQDVVMLVR DVAVGAAAEK EVEADALAPT AVAAVKAFEK
YVRSCLAVYY QKIRPVNA
//
