ID C5RAF4_WEIPA Unreviewed; 240 AA.
AC C5RAF4;
DT 01-SEP-2009, integrated into UniProtKB/TrEMBL.
DT 01-SEP-2009, sequence version 1.
DT 27-MAR-2024, entry version 63.
DE RecName: Full=Probable transcriptional regulatory protein HMPREF0877_0949 {ECO:0000256|HAMAP-Rule:MF_00693};
GN ORFNames=HMPREF0877_0949 {ECO:0000313|EMBL:EER74797.1};
OS Weissella paramesenteroides ATCC 33313.
OC Bacteria; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae; Weissella.
OX NCBI_TaxID=585506 {ECO:0000313|EMBL:EER74797.1, ECO:0000313|Proteomes:UP000004528};
RN [1] {ECO:0000313|EMBL:EER74797.1, ECO:0000313|Proteomes:UP000004528}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 33313 {ECO:0000313|EMBL:EER74797.1,
RC ECO:0000313|Proteomes:UP000004528};
RA Qin X., Bachman B., Battles P., Bell A., Bess C., Bickham C., Chaboub L.,
RA Chen D., Coyle M., Deiros D.R., Dinh H., Forbes L., Fowler G.,
RA Francisco L., Fu Q., Gubbala S., Hale W., Han Y., Hemphill L.,
RA Highlander S.K., Hirani K., Hogues M., Jackson L., Jakkamsetti A.,
RA Javaid M., Jiang H., Korchina V., Kovar C., Lara F., Lee S., Mata R.,
RA Mathew T., Moen C., Morales K., Munidasa M., Nazareth L., Ngo R.,
RA Nguyen L., Okwuonu G., Ongeri F., Patil S., Petrosino J., Pham C., Pham P.,
RA Pu L.-L., Puazo M., Raj R., Reid J., Rouhana J., Saada N., Shang Y.,
RA Simmons D., Thornton R., Warren J., Weissenberger G., Zhang J., Zhang L.,
RA Zhou C., Zhu D., Muzny D., Worley K., Gibbs R.;
RL Submitted (APR-2009) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|HAMAP-Rule:MF_00693}.
CC -!- SIMILARITY: Belongs to the TACO1 family.
CC {ECO:0000256|ARBA:ARBA00008724, ECO:0000256|HAMAP-Rule:MF_00693}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EER74797.1}.
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DR EMBL; ACKU01000013; EER74797.1; -; Genomic_DNA.
DR RefSeq; WP_002828532.1; NZ_GG697130.1.
DR AlphaFoldDB; C5RAF4; -.
DR STRING; 585506.HMPREF0877_0949; -.
DR GeneID; 72404422; -.
DR eggNOG; COG0217; Bacteria.
DR HOGENOM; CLU_062974_3_0_9; -.
DR OrthoDB; 9781053at2; -.
DR Proteomes; UP000004528; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:UniProtKB-UniRule.
DR Gene3D; 1.10.10.200; -; 1.
DR Gene3D; 3.30.70.980; -; 2.
DR HAMAP; MF_00693; Transcrip_reg_TACO1; 1.
DR InterPro; IPR017856; Integrase-like_N.
DR InterPro; IPR048300; TACO1_YebC-like_2nd/3rd_dom.
DR InterPro; IPR049083; TACO1_YebC_N.
DR InterPro; IPR002876; Transcrip_reg_TACO1-like.
DR InterPro; IPR026564; Transcrip_reg_TACO1-like_dom3.
DR InterPro; IPR029072; YebC-like.
DR NCBIfam; TIGR01033; YebC/PmpR family DNA-binding transcriptional regulator; 1.
DR PANTHER; PTHR12532:SF6; TRANSCRIPTIONAL REGULATORY PROTEIN YEBC-RELATED; 1.
DR PANTHER; PTHR12532; UNCHARACTERIZED; 1.
DR Pfam; PF20772; TACO1_YebC_N; 1.
DR Pfam; PF01709; Transcrip_reg; 1.
DR SUPFAM; SSF75625; YebC-like; 1.
PE 3: Inferred from homology;
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490, ECO:0000256|HAMAP-Rule:MF_00693};
KW DNA-binding {ECO:0000256|HAMAP-Rule:MF_00693, ECO:0000313|EMBL:EER74797.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000004528};
KW Transcription {ECO:0000256|ARBA:ARBA00023163, ECO:0000256|HAMAP-
KW Rule:MF_00693};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015, ECO:0000256|HAMAP-
KW Rule:MF_00693}.
FT DOMAIN 5..75
FT /note="TACO1/YebC-like N-terminal"
FT /evidence="ECO:0000259|Pfam:PF20772"
FT DOMAIN 81..238
FT /note="TACO1/YebC-like second and third"
FT /evidence="ECO:0000259|Pfam:PF01709"
FT REGION 1..21
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 240 AA; 26436 MW; 06007A31D16C9911 CRC64;
MSGHSKWHNI QGRKNAQDAK RGKIFQKLAR DLYTAAKAGG VDPDSNSSLR LVIDKAKAAN
MPKDNIQRAL DKASGANGAN YQELTYEGYG PAGIAVLVEA LTDNTNRTAS SVRSSFKHFG
GELGTSGSVS FQFDRKGYLE IERDEDTEID EDQLFEDMLD AGAEDMKTFD DQFEIYTDPK
SFPEVRDALA AKGYQFSIDE VTMVAQNPMA VPEDKQESLD NLVAELEEND DVQAVFTTAE
//
