ID C5WYW6_SORBI Unreviewed; 289 AA.
AC C5WYW6;
DT 01-SEP-2009, integrated into UniProtKB/TrEMBL.
DT 01-SEP-2009, sequence version 1.
DT 27-MAR-2024, entry version 58.
DE RecName: Full=Gnk2-homologous domain-containing protein {ECO:0000259|PROSITE:PS51473};
GN ORFNames=SORBI_3001G509800 {ECO:0000313|EMBL:EER92884.1};
OS Sorghum bicolor (Sorghum) (Sorghum vulgare).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum.
OX NCBI_TaxID=4558 {ECO:0000313|EMBL:EER92884.1, ECO:0000313|Proteomes:UP000000768};
RN [1] {ECO:0000313|EMBL:EER92884.1, ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=19189423; DOI=10.1038/nature07723;
RA Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J.,
RA Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J.,
RA Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J.,
RA Feltus F.A., Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M.,
RA Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L.,
RA Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P.,
RA Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman,
RA Ware D., Westhoff P., Mayer K.F., Messing J., Rokhsar D.S.;
RT "The Sorghum bicolor genome and the diversification of grasses.";
RL Nature 457:551-556(2009).
RN [2] {ECO:0000313|EMBL:EER92884.1}
RP NUCLEOTIDE SEQUENCE.
RA Paterson A., Mullet J., Bowers J., Bruggmann R., Dubchak I., Grimwood J.,
RA Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J.,
RA Spannagl M., Tang H., Wang X., Wicker T., Bharti A., Chapman J., Feltus F.,
RA Gowik U., Grigoriev I., Lyons E., Maher C., Martis M., Narechania A.,
RA Otillar R., Penning B., Salamov A., Wang Y., Zhang L., Carpita N.,
RA Freeling M., Gingle A., Hash C., Keller B., Klein P., Kresovich S.,
RA Mccann M., Ming R., Peterson D., Rahman M., Ware D., Westhoff P., Mayer K.,
RA Messing J., Sims D., Jenkins J., Shu S., Rokhsar D.;
RT "WGS assembly of Sorghum bicolor.";
RL Submitted (FEB-2017) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=29161754; DOI=10.1111/tpj.13781;
RA McCormick R.F., Truong S.K., Sreedasyam A., Jenkins J., Shu S., Sims D.,
RA Kennedy M., Amirebrahimi M., Weers B.D., McKinley B., Mattison A.,
RA Morishige D.T., Grimwood J., Schmutz J., Mullet J.E.;
RT "The Sorghum bicolor reference genome: improved assembly, gene annotations,
RT a transcriptome atlas, and signatures of genome organization.";
RL Plant J. 93:338-354(2018).
CC -!- SUBCELLULAR LOCATION: Cell junction, plasmodesma
CC {ECO:0000256|ARBA:ARBA00024184}. Cell membrane
CC {ECO:0000256|ARBA:ARBA00004251}; Single-pass type I membrane protein
CC {ECO:0000256|ARBA:ARBA00004251}. Membrane
CC {ECO:0000256|ARBA:ARBA00004479}; Single-pass type I membrane protein
CC {ECO:0000256|ARBA:ARBA00004479}.
CC -!- SIMILARITY: Belongs to the cysteine-rich repeat secretory protein
CC family. Plasmodesmata-located proteins (PDLD) subfamily.
CC {ECO:0000256|ARBA:ARBA00038393}.
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DR EMBL; CM000760; EER92884.1; -; Genomic_DNA.
DR EMBL; CM000760; OQU93264.1; -; Genomic_DNA.
DR RefSeq; XP_002465886.1; XM_002465841.1.
DR AlphaFoldDB; C5WYW6; -.
DR STRING; 4558.C5WYW6; -.
DR EnsemblPlants; EER92884; EER92884; SORBI_3001G509800.
DR EnsemblPlants; OQU93264; OQU93264; SORBI_3001G509800.
DR GeneID; 8080592; -.
DR Gramene; EER92884; EER92884; SORBI_3001G509800.
DR Gramene; OQU93264; OQU93264; SORBI_3001G509800.
DR KEGG; sbi:8080592; -.
DR eggNOG; ENOG502QUWZ; Eukaryota.
DR HOGENOM; CLU_000288_33_1_1; -.
DR InParanoid; C5WYW6; -.
DR OMA; YLEKCYI; -.
DR OrthoDB; 621052at2759; -.
DR Proteomes; UP000000768; Chromosome 1.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0009506; C:plasmodesma; IBA:GO_Central.
DR GO; GO:0010497; P:plasmodesmata-mediated intercellular transport; IBA:GO_Central.
DR GO; GO:0046739; P:transport of virus in multicellular host; IBA:GO_Central.
DR Gene3D; 3.30.430.20; Gnk2 domain, C-X8-C-X2-C motif; 2.
DR InterPro; IPR002902; GNK2.
DR InterPro; IPR038408; GNK2_sf.
DR PANTHER; PTHR32080; ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE; 1.
DR PANTHER; PTHR32080:SF24; PLASMODESMATA-LOCATED PROTEIN 3; 1.
DR Pfam; PF01657; Stress-antifung; 2.
DR PROSITE; PS51473; GNK2; 2.
PE 3: Inferred from homology;
KW Cell junction {ECO:0000256|ARBA:ARBA00022949};
KW Disulfide bond {ECO:0000256|ARBA:ARBA00023157};
KW Host-virus interaction {ECO:0000256|ARBA:ARBA00022581};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000000768};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Signal {ECO:0000256|ARBA:ARBA00022729, ECO:0000256|SAM:SignalP};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT SIGNAL 1..27
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 28..289
FT /note="Gnk2-homologous domain-containing protein"
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5002956588"
FT TRANSMEM 259..279
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 30..136
FT /note="Gnk2-homologous"
FT /evidence="ECO:0000259|PROSITE:PS51473"
FT DOMAIN 142..242
FT /note="Gnk2-homologous"
FT /evidence="ECO:0000259|PROSITE:PS51473"
SQ SEQUENCE 289 AA; 29566 MW; 57AAE17D893B39C6 CRC64;
MGIRRARRFL FLAVFVLLLH APPPASCADI YALIYKGCAN QSFPGGVAPA SIAALSSTLS
TQSASAKFYK TSSSSASTAS STSVFGLFQC RGDLSASDCA ACVSRAVSSW QGVCGASVAA
RVQLAGCLAL YEVSGFPQVS GIQMLFKTCG TGGGGGGGDF EMRRDTAFSA LESGVATSSG
GFVATSYQAV YAMAQCEGDL STGDCSQCVN QAVQHVEVEC GGAPSGQVYL DKCYISYSYY
PHGVPHGGGA GGQQTAKTVA IVLGGAVGLG FVVICLLFAR SLVKKKDEY
//
