ID C5X0T3_SORBI Unreviewed; 533 AA.
AC C5X0T3;
DT 01-SEP-2009, integrated into UniProtKB/TrEMBL.
DT 01-SEP-2009, sequence version 1.
DT 27-MAR-2024, entry version 72.
DE RecName: Full=Cupin type-1 domain-containing protein {ECO:0000259|SMART:SM00835};
GN ORFNames=SORBI_3001G380800 {ECO:0000313|EMBL:EER92308.1};
OS Sorghum bicolor (Sorghum) (Sorghum vulgare).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum.
OX NCBI_TaxID=4558 {ECO:0000313|EMBL:EER92308.1, ECO:0000313|Proteomes:UP000000768};
RN [1] {ECO:0000313|EMBL:EER92308.1, ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=19189423; DOI=10.1038/nature07723;
RA Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J.,
RA Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J.,
RA Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J.,
RA Feltus F.A., Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M.,
RA Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L.,
RA Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P.,
RA Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman,
RA Ware D., Westhoff P., Mayer K.F., Messing J., Rokhsar D.S.;
RT "The Sorghum bicolor genome and the diversification of grasses.";
RL Nature 457:551-556(2009).
RN [2] {ECO:0000313|EMBL:EER92308.1}
RP NUCLEOTIDE SEQUENCE.
RA Paterson A., Mullet J., Bowers J., Bruggmann R., Dubchak I., Grimwood J.,
RA Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J.,
RA Spannagl M., Tang H., Wang X., Wicker T., Bharti A., Chapman J., Feltus F.,
RA Gowik U., Grigoriev I., Lyons E., Maher C., Martis M., Narechania A.,
RA Otillar R., Penning B., Salamov A., Wang Y., Zhang L., Carpita N.,
RA Freeling M., Gingle A., Hash C., Keller B., Klein P., Kresovich S.,
RA Mccann M., Ming R., Peterson D., Rahman M., Ware D., Westhoff P., Mayer K.,
RA Messing J., Sims D., Jenkins J., Shu S., Rokhsar D.;
RT "WGS assembly of Sorghum bicolor.";
RL Submitted (FEB-2017) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=29161754; DOI=10.1111/tpj.13781;
RA McCormick R.F., Truong S.K., Sreedasyam A., Jenkins J., Shu S., Sims D.,
RA Kennedy M., Amirebrahimi M., Weers B.D., McKinley B., Mattison A.,
RA Morishige D.T., Grimwood J., Schmutz J., Mullet J.E.;
RT "The Sorghum bicolor reference genome: improved assembly, gene annotations,
RT a transcriptome atlas, and signatures of genome organization.";
RL Plant J. 93:338-354(2018).
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DR EMBL; CM000760; EER92308.1; -; Genomic_DNA.
DR EMBL; CM000760; OQU92642.1; -; Genomic_DNA.
DR RefSeq; XP_002465310.1; XM_002465265.1.
DR AlphaFoldDB; C5X0T3; -.
DR STRING; 4558.C5X0T3; -.
DR EnsemblPlants; EER92308; EER92308; SORBI_3001G380800.
DR EnsemblPlants; OQU92642; OQU92642; SORBI_3001G380800.
DR GeneID; 8082336; -.
DR Gramene; EER92308; EER92308; SORBI_3001G380800.
DR Gramene; OQU92642; OQU92642; SORBI_3001G380800.
DR KEGG; sbi:8082336; -.
DR eggNOG; ENOG502QRZP; Eukaryota.
DR HOGENOM; CLU_027536_0_0_1; -.
DR InParanoid; C5X0T3; -.
DR OMA; HSGIGVY; -.
DR OrthoDB; 464040at2759; -.
DR Proteomes; UP000000768; Chromosome 1.
DR CDD; cd02245; cupin_7S_vicilin-like_C; 1.
DR CDD; cd02244; cupin_7S_vicilin-like_N; 1.
DR Gene3D; 2.60.120.10; Jelly Rolls; 2.
DR InterPro; IPR006045; Cupin_1.
DR InterPro; IPR014710; RmlC-like_jellyroll.
DR InterPro; IPR011051; RmlC_Cupin_sf.
DR PANTHER; PTHR31189:SF2; CUPIN TYPE-1 DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR31189; OS03G0336100 PROTEIN-RELATED; 1.
DR Pfam; PF00190; Cupin_1; 1.
DR SMART; SM00835; Cupin_1; 2.
DR SUPFAM; SSF51182; RmlC-like cupins; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000000768};
KW Signal {ECO:0000256|SAM:SignalP}.
FT SIGNAL 1..23
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 24..533
FT /note="Cupin type-1 domain-containing protein"
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5002956644"
FT DOMAIN 59..221
FT /note="Cupin type-1"
FT /evidence="ECO:0000259|SMART:SM00835"
FT DOMAIN 335..484
FT /note="Cupin type-1"
FT /evidence="ECO:0000259|SMART:SM00835"
FT REGION 32..53
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 240..296
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 312..336
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 498..533
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 241..256
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 280..296
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 501..525
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 533 AA; 57868 MW; D412A07608140577 CRC64;
MDRAVMAPPL LVLLLLLLSR CSAAAPRHGA EGWWEEGEGE WRPAEEEEQG KQGKGRGLFV
LDRLEKVVES EGGQVRVVRG QPWPPAAAFA CRDGLMHIGF ITMEPKTLFV PQYLDSSITL
FVQRGEVKVG YIHKDELVER KLKMGDVLHI DAGSTFYLVN TGKGQRLQII CSIDASDSLG
FFGPPYQAFY LGGAGHPASV IAGFGPKTLT HAFNATYDEL ASILLAKTGG PIVHYTADVE
PEGGGGEEER GQGGNDVLDR GTRCEGARAG AGAGAWRPVG RGDEGDECGS DDDARRPTWS
WRKLVNRFIG GGAGGGDTAE TNKKGKKKGG ATEPYNLYDS EPGFRNSYGW TVSVDKHQYE
PLKHPDIGVY LVNLTAGSLL APHVNPRATE YGVVLGGEGT IQVVFPNGSL AMSEVVRPGD
VFWIPRYFPF CQVASRGGPF EFFGFTTSAR RNRPQFLVGA SSVLRTLLGP EIAAAFGARE
EEFSKLVRAQ REALIMPSFH ASGKEEEEEK HGKKKGRRER EEAPVPLVVE QVV
//
