ID C5X6P9_SORBI Unreviewed; 624 AA.
AC C5X6P9;
DT 01-SEP-2009, integrated into UniProtKB/TrEMBL.
DT 01-SEP-2009, sequence version 1.
DT 27-MAR-2024, entry version 81.
DE RecName: Full=Dynamin-related protein 1E {ECO:0008006|Google:ProtNLM};
GN ORFNames=SORBI_3002G140600 {ECO:0000313|EMBL:EER98546.1};
OS Sorghum bicolor (Sorghum) (Sorghum vulgare).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum.
OX NCBI_TaxID=4558 {ECO:0000313|EMBL:EER98546.1, ECO:0000313|Proteomes:UP000000768};
RN [1] {ECO:0000313|EMBL:EER98546.1, ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=19189423; DOI=10.1038/nature07723;
RA Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J.,
RA Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J.,
RA Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J.,
RA Feltus F.A., Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M.,
RA Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L.,
RA Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P.,
RA Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman,
RA Ware D., Westhoff P., Mayer K.F., Messing J., Rokhsar D.S.;
RT "The Sorghum bicolor genome and the diversification of grasses.";
RL Nature 457:551-556(2009).
RN [2] {ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=29161754; DOI=10.1111/tpj.13781;
RA McCormick R.F., Truong S.K., Sreedasyam A., Jenkins J., Shu S., Sims D.,
RA Kennedy M., Amirebrahimi M., Weers B.D., McKinley B., Mattison A.,
RA Morishige D.T., Grimwood J., Schmutz J., Mullet J.E.;
RT "The Sorghum bicolor reference genome: improved assembly, gene annotations,
RT a transcriptome atlas, and signatures of genome organization.";
RL Plant J. 93:338-354(2018).
CC -!- SIMILARITY: Belongs to the TRAFAC class dynamin-like GTPase
CC superfamily. Dynamin/Fzo/YdjA family. {ECO:0000256|RuleBase:RU003932}.
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DR EMBL; CM000761; EER98546.1; -; Genomic_DNA.
DR RefSeq; XP_002462025.1; XM_002461980.1.
DR AlphaFoldDB; C5X6P9; -.
DR STRING; 4558.C5X6P9; -.
DR EnsemblPlants; EER98546; EER98546; SORBI_3002G140600.
DR GeneID; 8062585; -.
DR Gramene; EER98546; EER98546; SORBI_3002G140600.
DR KEGG; sbi:8062585; -.
DR eggNOG; KOG0446; Eukaryota.
DR HOGENOM; CLU_008964_5_3_1; -.
DR InParanoid; C5X6P9; -.
DR OMA; DGHYRNI; -.
DR OrthoDB; 1052588at2759; -.
DR Proteomes; UP000000768; Chromosome 2.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:0016020; C:membrane; IBA:GO_Central.
DR GO; GO:0005874; C:microtubule; IBA:GO_Central.
DR GO; GO:0005739; C:mitochondrion; IEA:EnsemblPlants.
DR GO; GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
DR GO; GO:0003924; F:GTPase activity; IBA:GO_Central.
DR GO; GO:0008017; F:microtubule binding; IBA:GO_Central.
DR GO; GO:0050832; P:defense response to fungus; IEA:EnsemblPlants.
DR CDD; cd08771; DLP_1; 1.
DR Gene3D; 1.20.120.1240; Dynamin, middle domain; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR022812; Dynamin.
DR InterPro; IPR001401; Dynamin_GTPase.
DR InterPro; IPR019762; Dynamin_GTPase_CS.
DR InterPro; IPR045063; Dynamin_N.
DR InterPro; IPR000375; Dynamin_stalk.
DR InterPro; IPR030381; G_DYNAMIN_dom.
DR InterPro; IPR003130; GED.
DR InterPro; IPR020850; GED_dom.
DR InterPro; IPR027417; P-loop_NTPase.
DR PANTHER; PTHR11566; DYNAMIN; 1.
DR PANTHER; PTHR11566:SF236; OS09G0572900 PROTEIN; 1.
DR Pfam; PF01031; Dynamin_M; 1.
DR Pfam; PF00350; Dynamin_N; 1.
DR Pfam; PF02212; GED; 1.
DR PRINTS; PR00195; DYNAMIN.
DR SMART; SM00053; DYNc; 1.
DR SMART; SM00302; GED; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS00410; G_DYNAMIN_1; 1.
DR PROSITE; PS51718; G_DYNAMIN_2; 1.
DR PROSITE; PS51388; GED; 1.
PE 3: Inferred from homology;
KW GTP-binding {ECO:0000256|RuleBase:RU003932};
KW Nucleotide-binding {ECO:0000256|RuleBase:RU003932};
KW Reference proteome {ECO:0000313|Proteomes:UP000000768}.
FT DOMAIN 34..303
FT /note="Dynamin-type G"
FT /evidence="ECO:0000259|PROSITE:PS51718"
FT DOMAIN 530..623
FT /note="GED"
FT /evidence="ECO:0000259|PROSITE:PS51388"
FT REGION 501..527
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 624 AA; 69282 MW; 0CD75288610098AA CRC64;
MASMEGLIGL MNRIQRACTA LGDHGGGSDL PTLWESLPTI AVVGGQSSGK SSVLESIVGT
DFLPRGSGIV TRRPLVLQLQ QTDNGSQEYA EFLHKPKTRF SDFALVRQEI ADETDRLTGK
TKQISPVPIH LSIYSPKVVN LTLIDLPGLT KVAVEGQSEN IVQDIENMVR SYVDKPNCII
LAISPANQDI ATSDAIKLSK EVDPTGERTF GVLTKLDLMD KGTNALDVLE GRAYRLQNPW
VGIVNRSQAD INRKVGMLSA REKEREYFET SPDYAHLASR MGSEYLAKLL SQHLESVIKA
RIPSITATIN KTIDELESEL DIIGRGVASD PGAQLYTILD LCRAFDRVFK EHLDGGRSGG
DRIYGVFDHK LPAAFKKLPF DRYLSVQNVK KVVSEADGYQ PHLIAPEQGY RRLIEKGITY
FRGPAEATVD AVHVVLKDLV RKSIGETEQL RRFPTLQAAI ATAANEALER FREDGRSTAL
RLVDMEAAYV TVEFFRKLPQ DPADPSSKVG PNKPPVEPSP TPDRYGDGHF RNIASNVSQY
IRMVGDELLQ KIPKAAVHCQ VREAKRSLLN HFYVQIGKKE GGEFGHMLDE DPAMMERRQQ
CLKRLELYKS ARDEVDSVAW SSSR
//
