ID C5XSJ7_SORBI Unreviewed; 416 AA.
AC C5XSJ7;
DT 01-SEP-2009, integrated into UniProtKB/TrEMBL.
DT 01-SEP-2009, sequence version 1.
DT 24-JAN-2024, entry version 63.
DE RecName: Full=UBA domain-containing protein {ECO:0000259|PROSITE:PS50030};
GN ORFNames=SORBI_3004G153200 {ECO:0000313|EMBL:EES05114.1};
OS Sorghum bicolor (Sorghum) (Sorghum vulgare).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum.
OX NCBI_TaxID=4558 {ECO:0000313|EMBL:EES05114.1, ECO:0000313|Proteomes:UP000000768};
RN [1] {ECO:0000313|EMBL:EES05114.1, ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=19189423; DOI=10.1038/nature07723;
RA Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J.,
RA Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J.,
RA Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J.,
RA Feltus F.A., Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M.,
RA Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L.,
RA Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P.,
RA Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman,
RA Ware D., Westhoff P., Mayer K.F., Messing J., Rokhsar D.S.;
RT "The Sorghum bicolor genome and the diversification of grasses.";
RL Nature 457:551-556(2009).
RN [2] {ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=29161754; DOI=10.1111/tpj.13781;
RA McCormick R.F., Truong S.K., Sreedasyam A., Jenkins J., Shu S., Sims D.,
RA Kennedy M., Amirebrahimi M., Weers B.D., McKinley B., Mattison A.,
RA Morishige D.T., Grimwood J., Schmutz J., Mullet J.E.;
RT "The Sorghum bicolor reference genome: improved assembly, gene annotations,
RT a transcriptome atlas, and signatures of genome organization.";
RL Plant J. 93:338-354(2018).
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DR EMBL; CM000763; EES05114.1; -; Genomic_DNA.
DR RefSeq; XP_002452138.1; XM_002452093.1.
DR AlphaFoldDB; C5XSJ7; -.
DR STRING; 4558.C5XSJ7; -.
DR EnsemblPlants; EES05114; EES05114; SORBI_3004G153200.
DR GeneID; 8056074; -.
DR Gramene; EES05114; EES05114; SORBI_3004G153200.
DR KEGG; sbi:8056074; -.
DR eggNOG; KOG2699; Eukaryota.
DR HOGENOM; CLU_054465_0_0_1; -.
DR InParanoid; C5XSJ7; -.
DR OMA; RFGCEMP; -.
DR OrthoDB; 315784at2759; -.
DR Proteomes; UP000000768; Chromosome 4.
DR CDD; cd10461; PUB_UBA_plant; 1.
DR Gene3D; 1.20.58.2190; -; 1.
DR Gene3D; 1.10.8.10; DNA helicase RuvA subunit, C-terminal domain; 1.
DR InterPro; IPR036339; PUB-like_dom_sf.
DR InterPro; IPR018997; PUB_domain.
DR InterPro; IPR015940; UBA.
DR InterPro; IPR009060; UBA-like_sf.
DR InterPro; IPR013087; Znf_C2H2_type.
DR PANTHER; PTHR46713; F13M7.16 PROTEIN; 1.
DR PANTHER; PTHR46713:SF1; F13M7.16 PROTEIN; 1.
DR Pfam; PF09409; PUB; 1.
DR Pfam; PF00627; UBA; 1.
DR SMART; SM00580; PUG; 1.
DR SMART; SM00165; UBA; 1.
DR SUPFAM; SSF143503; PUG domain-like; 1.
DR SUPFAM; SSF46934; UBA-like; 1.
DR PROSITE; PS50030; UBA; 1.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000000768}.
FT DOMAIN 114..155
FT /note="UBA"
FT /evidence="ECO:0000259|PROSITE:PS50030"
FT REGION 193..213
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 257..304
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 257..274
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 416 AA; 46861 MW; 7BABF509C51E2F6D CRC64;
MAGLSLRCGD CGAQLRSVEE AQAHAEATNH ANFVESTEAV LNLVCSDCGK PCRSQTEVDL
HTKRTGHTEF ADKTAEAAKP IDLEAPLKPA SEDAMDVDAS ASASAEPQEM VVPEVNKEML
TDLEGMGFST ARATRALHFS GNSTIEGAIN WLSEHQEDAD IDEMPLVPAN SKTEANKPSL
TPEEMKIKAQ ELRERARKKK EEEERRMERE REKERIRIGK ELLEAKRIEE QNERKRMIEL
RRLEKEEEKR AREKIRQKLE EDKAERRRKL GLPPEDPAAA KPSAPPPVEE KKSALPVRPA
TKAERMRDCL RNLKQQNKDD DAKVKRAFQT LLTYIGNVAK NPDEEKFRKI RLTNATFQER
VGNLHGGIEF LELCGFEKLE GNEFLFLARE KVDKAILNTA GAELNSAITN PFFGVL
//
