ID C5XSP8_SORBI Unreviewed; 305 AA.
AC C5XSP8;
DT 01-SEP-2009, integrated into UniProtKB/TrEMBL.
DT 01-SEP-2009, sequence version 1.
DT 27-MAR-2024, entry version 78.
DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EES07547.1};
GN ORFNames=SORBI_3004G303600 {ECO:0000313|EMBL:EES07547.1};
OS Sorghum bicolor (Sorghum) (Sorghum vulgare).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum.
OX NCBI_TaxID=4558 {ECO:0000313|EMBL:EES07547.1, ECO:0000313|Proteomes:UP000000768};
RN [1] {ECO:0000313|EMBL:EES07547.1, ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=19189423; DOI=10.1038/nature07723;
RA Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J.,
RA Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J.,
RA Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J.,
RA Feltus F.A., Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M.,
RA Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L.,
RA Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P.,
RA Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman,
RA Ware D., Westhoff P., Mayer K.F., Messing J., Rokhsar D.S.;
RT "The Sorghum bicolor genome and the diversification of grasses.";
RL Nature 457:551-556(2009).
RN [2] {ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=29161754; DOI=10.1111/tpj.13781;
RA McCormick R.F., Truong S.K., Sreedasyam A., Jenkins J., Shu S., Sims D.,
RA Kennedy M., Amirebrahimi M., Weers B.D., McKinley B., Mattison A.,
RA Morishige D.T., Grimwood J., Schmutz J., Mullet J.E.;
RT "The Sorghum bicolor reference genome: improved assembly, gene annotations,
RT a transcriptome atlas, and signatures of genome organization.";
RL Plant J. 93:338-354(2018).
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DR EMBL; CM000763; EES07547.1; -; Genomic_DNA.
DR RefSeq; XP_002454571.1; XM_002454526.1.
DR AlphaFoldDB; C5XSP8; -.
DR SMR; C5XSP8; -.
DR STRING; 4558.C5XSP8; -.
DR EnsemblPlants; EES07547; EES07547; SORBI_3004G303600.
DR GeneID; 8078889; -.
DR Gramene; EES07547; EES07547; SORBI_3004G303600.
DR KEGG; sbi:8078889; -.
DR eggNOG; KOG0048; Eukaryota.
DR HOGENOM; CLU_028567_6_5_1; -.
DR InParanoid; C5XSP8; -.
DR OMA; LNMEYIS; -.
DR OrthoDB; 887435at2759; -.
DR Proteomes; UP000000768; Chromosome 4.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0000976; F:transcription cis-regulatory region binding; IBA:GO_Central.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IBA:GO_Central.
DR CDD; cd00167; SANT; 2.
DR Gene3D; 1.10.10.60; Homeodomain-like; 2.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR017930; Myb_dom.
DR InterPro; IPR001005; SANT/Myb.
DR PANTHER; PTHR47997; MYB DOMAIN PROTEIN 55; 1.
DR PANTHER; PTHR47997:SF11; MYB TRANSCRIPTION FACTOR; 1.
DR Pfam; PF00249; Myb_DNA-binding; 2.
DR SMART; SM00717; SANT; 2.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR PROSITE; PS51294; HTH_MYB; 2.
DR PROSITE; PS50090; MYB_LIKE; 2.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000000768}.
FT DOMAIN 10..62
FT /note="HTH myb-type"
FT /evidence="ECO:0000259|PROSITE:PS51294"
FT DOMAIN 10..62
FT /note="Myb-like"
FT /evidence="ECO:0000259|PROSITE:PS50090"
FT DOMAIN 63..117
FT /note="HTH myb-type"
FT /evidence="ECO:0000259|PROSITE:PS51294"
FT DOMAIN 63..113
FT /note="Myb-like"
FT /evidence="ECO:0000259|PROSITE:PS50090"
FT REGION 115..178
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 161..176
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 305 AA; 32355 MW; 70E3B2D865444DA7 CRC64;
MGCKACDKPK PNYRKGLWSP EEDQKLRDYI LLHGHGCWSA LPAKAGLHRN GKSCRLRWIN
YLRPGLKHGT FSPEEEETVM SLHATLGNKW SRIARHLPGR TDNEVKNHWN SYLKKRVEGK
EGRPSTPAPA AATDSGTDSD DSHCVKPGDG GAAQEAPADS GSSEPRESSS ADSSCLTDPP
AACRPHALVA APKVMFADWL DTDYYMGCGG GGGGGGPPPA VAAPGLGAAA AAGVDRDQQH
QVMSQGSVQQ VDGPSGVDVS SLHGFGDSGA SCWEFQENFD DGIDDQLQTA GFCDLLSMSD
YFGLN
//
