ID C5XTC1_SORBI Unreviewed; 957 AA.
AC C5XTC1;
DT 01-SEP-2009, integrated into UniProtKB/TrEMBL.
DT 01-SEP-2009, sequence version 1.
DT 24-JAN-2024, entry version 77.
DE RecName: Full=Clp R domain-containing protein {ECO:0000259|PROSITE:PS51903};
GN ORFNames=SORBI_3004G162400 {ECO:0000313|EMBL:EES05165.1};
OS Sorghum bicolor (Sorghum) (Sorghum vulgare).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum.
OX NCBI_TaxID=4558 {ECO:0000313|EMBL:EES05165.1, ECO:0000313|Proteomes:UP000000768};
RN [1] {ECO:0000313|EMBL:EES05165.1, ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=19189423; DOI=10.1038/nature07723;
RA Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J.,
RA Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J.,
RA Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J.,
RA Feltus F.A., Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M.,
RA Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L.,
RA Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P.,
RA Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman,
RA Ware D., Westhoff P., Mayer K.F., Messing J., Rokhsar D.S.;
RT "The Sorghum bicolor genome and the diversification of grasses.";
RL Nature 457:551-556(2009).
RN [2] {ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=29161754; DOI=10.1111/tpj.13781;
RA McCormick R.F., Truong S.K., Sreedasyam A., Jenkins J., Shu S., Sims D.,
RA Kennedy M., Amirebrahimi M., Weers B.D., McKinley B., Mattison A.,
RA Morishige D.T., Grimwood J., Schmutz J., Mullet J.E.;
RT "The Sorghum bicolor reference genome: improved assembly, gene annotations,
RT a transcriptome atlas, and signatures of genome organization.";
RL Plant J. 93:338-354(2018).
CC -!- SIMILARITY: Belongs to the ClpA/ClpB family.
CC {ECO:0000256|RuleBase:RU004432}.
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DR EMBL; CM000763; EES05165.1; -; Genomic_DNA.
DR RefSeq; XP_002452189.1; XM_002452144.1.
DR AlphaFoldDB; C5XTC1; -.
DR STRING; 4558.C5XTC1; -.
DR EnsemblPlants; EES05165; EES05165; SORBI_3004G162400.
DR GeneID; 8059613; -.
DR Gramene; EES05165; EES05165; SORBI_3004G162400.
DR KEGG; sbi:8059613; -.
DR eggNOG; KOG1051; Eukaryota.
DR HOGENOM; CLU_005070_4_2_1; -.
DR InParanoid; C5XTC1; -.
DR OMA; SCKRVFE; -.
DR OrthoDB; 275944at2759; -.
DR Proteomes; UP000000768; Chromosome 4.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR CDD; cd19499; RecA-like_ClpB_Hsp104-like; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 1.10.1780.10; Clp, N-terminal domain; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 3.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR003959; ATPase_AAA_core.
DR InterPro; IPR019489; Clp_ATPase_C.
DR InterPro; IPR036628; Clp_N_dom_sf.
DR InterPro; IPR004176; Clp_R_dom.
DR InterPro; IPR001270; ClpA/B.
DR InterPro; IPR018368; ClpA/B_CS1.
DR InterPro; IPR028299; ClpA/B_CS2.
DR InterPro; IPR041546; ClpA/ClpB_AAA_lid.
DR InterPro; IPR027417; P-loop_NTPase.
DR PANTHER; PTHR11638; ATP-DEPENDENT CLP PROTEASE; 1.
DR PANTHER; PTHR11638:SF185; ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT; 1.
DR Pfam; PF00004; AAA; 1.
DR Pfam; PF07724; AAA_2; 1.
DR Pfam; PF17871; AAA_lid_9; 1.
DR Pfam; PF02861; Clp_N; 2.
DR Pfam; PF10431; ClpB_D2-small; 1.
DR PRINTS; PR00300; CLPPROTEASEA.
DR SMART; SM00382; AAA; 2.
DR SMART; SM01086; ClpB_D2-small; 1.
DR SUPFAM; SSF81923; Double Clp-N motif; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR PROSITE; PS51903; CLP_R; 1.
DR PROSITE; PS00870; CLPAB_1; 1.
DR PROSITE; PS00871; CLPAB_2; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840, ECO:0000256|RuleBase:RU004432};
KW Chaperone {ECO:0000256|ARBA:ARBA00023186, ECO:0000256|RuleBase:RU004432};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741,
KW ECO:0000256|RuleBase:RU004432};
KW Reference proteome {ECO:0000313|Proteomes:UP000000768};
KW Repeat {ECO:0000256|ARBA:ARBA00022737, ECO:0000256|PROSITE-
KW ProRule:PRU01251}.
FT DOMAIN 83..238
FT /note="Clp R"
FT /evidence="ECO:0000259|PROSITE:PS51903"
FT REGION 147..169
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 240..269
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 567..600
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 957 AA; 103673 MW; D83E2129FADE2B41 CRC64;
MEVCCCSTSS SSSVLTVGHG GAARMLAAPA GRWGAAAGFG RAMVLAHQLP LPLPLPLPRP
AARARARPAP RRRRGGGVVR AVFERFTERA VKAVVLSQRE ARGLGEPAVA PRHLFLGLVA
EDRSSGGFLS SGINIERARE ECRGIAAARD DADSTAAPSS RPGSGGLDTD VPFSATAKQV
FDVAVVLSKN MGASFISPEH LAIALFTLDD PTTNNLLRSL GADPSHLASV AVDRLQAELA
KDGREPAEPS SFKVPKKAPA GAGRSAFSHS LTKKKDKGAL DQFCLDLTTQ ASGGFIDPII
GREDEIERVV QIICRRTKNN PILLGEAGVG KTAIAEGLAL RIANGDVPIY LVAKRILSLD
VGLLIAGAKE RGELESRVTN IIREVREAGD VILFIDEVHN LIGSGTVGKG KGSGLDIGNL
LKPALARGEL QCIAATTLDE HRMHFEKDKA LARRFQPVLV DEPSQEDAVK ILLGLREKYE
TYHKCKFTLE AINAAVYLSA RYIPDRQLPD KAIDLIDEAG SRARMESFNK KKEGQSSILL
KSPDEYWQEI RAAQAMHEVV LSNKAKYSPN ENAQESGSAT VEAPSRDNIE STSGSSLSAD
EPIVVGTEEI ARVASLWSGI PVQQLTADDK KLLVGLDDEL RKRVIGQDDA VVAISRAVKR
SRVGLNDPDR PIATLLFCGP TGVGKTELTK ALAASYFGSE SAMLRLDMSE YMERHTVSKL
IGSPPGYIGY GETGTLTEAV RRKPFTVVLM DEIEKAHPDI FNILLQIFED GHLTDSQGRK
VSFKNTLIVM TSNVGSTTIS KGRQSIGFLK EDTESSSYFA MKSLVMEELK AFFRPELLNR
IDEMVVFRPL EKTQMLAILD IILKEVKGRL LALGIGLEVS EAMKHLICQE GYDKSYGARP
LRRAVAHIIE DVISEAILFG EFKPGDTILM DIDAEGKPCM NHLDRQIVQV SDPTRTF
//