ID C5XUH0_SORBI Unreviewed; 527 AA.
AC C5XUH0;
DT 01-SEP-2009, integrated into UniProtKB/TrEMBL.
DT 01-SEP-2009, sequence version 1.
DT 24-JAN-2024, entry version 67.
DE RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=SORBI_3004G330800 {ECO:0000313|EMBL:EES07683.1};
OS Sorghum bicolor (Sorghum) (Sorghum vulgare).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum.
OX NCBI_TaxID=4558 {ECO:0000313|EMBL:EES07683.1, ECO:0000313|Proteomes:UP000000768};
RN [1] {ECO:0000313|EMBL:EES07683.1, ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=19189423; DOI=10.1038/nature07723;
RA Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J.,
RA Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J.,
RA Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J.,
RA Feltus F.A., Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M.,
RA Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L.,
RA Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P.,
RA Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman,
RA Ware D., Westhoff P., Mayer K.F., Messing J., Rokhsar D.S.;
RT "The Sorghum bicolor genome and the diversification of grasses.";
RL Nature 457:551-556(2009).
RN [2] {ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=29161754; DOI=10.1111/tpj.13781;
RA McCormick R.F., Truong S.K., Sreedasyam A., Jenkins J., Shu S., Sims D.,
RA Kennedy M., Amirebrahimi M., Weers B.D., McKinley B., Mattison A.,
RA Morishige D.T., Grimwood J., Schmutz J., Mullet J.E.;
RT "The Sorghum bicolor reference genome: improved assembly, gene annotations,
RT a transcriptome atlas, and signatures of genome organization.";
RL Plant J. 93:338-354(2018).
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC {ECO:0000256|ARBA:ARBA00007626}.
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DR EMBL; CM000763; EES07683.1; -; Genomic_DNA.
DR RefSeq; XP_002454707.1; XM_002454662.1.
DR AlphaFoldDB; C5XUH0; -.
DR STRING; 4558.C5XUH0; -.
DR EnsemblPlants; EES07683; EES07683; SORBI_3004G330800.
DR GeneID; 8056388; -.
DR Gramene; EES07683; EES07683; SORBI_3004G330800.
DR KEGG; sbi:8056388; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_019802_3_1_1; -.
DR InParanoid; C5XUH0; -.
DR OMA; LNWMETQ; -.
DR OrthoDB; 471267at2759; -.
DR Proteomes; UP000000768; Chromosome 4.
DR GO; GO:0005739; C:mitochondrion; IBA:GO_Central.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 2.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 1.
DR PANTHER; PTHR45717:SF13; OS02G0796400 PROTEIN; 1.
DR PANTHER; PTHR45717; OS12G0527900 PROTEIN; 1.
DR Pfam; PF01535; PPR; 2.
DR Pfam; PF13812; PPR_3; 1.
DR PROSITE; PS51375; PPR; 2.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000000768};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transit peptide {ECO:0000256|ARBA:ARBA00022946}.
FT REPEAT 191..225
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 367..401
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 527 AA; 59486 MW; D8982B9C92E5DF94 CRC64;
MAAAARSRLA VLRRLDLASR TPSNPKPLLL SSAFSSSTLS APLAAGRVRE DESSLLSRHL
LRLHLRSPRG AAAAAIDRWA RESVHISQPE LRRAIAMLRR ARRYEHALEI FSWMESCNSV
LLSSWDHAAR LDLIAKAYGT SQAEEYYNKL QSPAARQAAS FPLLHCYVTE RNVQKAETFM
AQLQSCGLPV DPHSFNEIMK LYIATFQYEK ALSVIDLMKR NNIPRNVLSY NLWMNVCAEV
SGVAPVQSVF QEMLNDETVE VGWSTYCTLA NIFRKNGLNT KAQACLRKAE TKLSPTGRLG
YSFVMTCYAA LNDSDGVMRL WEASKSVPGR IPAANYMTAM LCSIKVGDIS QAEWIFGSWE
AGCRKHDVRV SNVLLGAYVR NRWIEKAERL HLHMLEKGAR PNYKTWEILM EGYVQSRQMD
KAVGCMKKGL SLLKSCHWRP PLELMEAIGK HFEEQGSADD AYRYIKVLQR FNLTSLPLYK
SLIRAYINAD IVPPNILEMI AKDQIVTDEE MDRLIILASK IDITCNG
//
