ID C5Y3H6_SORBI Unreviewed; 271 AA.
AC C5Y3H6;
DT 01-SEP-2009, integrated into UniProtKB/TrEMBL.
DT 02-NOV-2016, sequence version 2.
DT 24-JAN-2024, entry version 67.
DE RecName: Full=WRKY domain-containing protein {ECO:0000259|PROSITE:PS50811};
GN ORFNames=SORBI_3005G013800 {ECO:0000313|EMBL:EES09137.2};
OS Sorghum bicolor (Sorghum) (Sorghum vulgare).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum.
OX NCBI_TaxID=4558 {ECO:0000313|EMBL:EES09137.2, ECO:0000313|Proteomes:UP000000768};
RN [1] {ECO:0000313|EMBL:EES09137.2, ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=19189423; DOI=10.1038/nature07723;
RA Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J.,
RA Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J.,
RA Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J.,
RA Feltus F.A., Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M.,
RA Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L.,
RA Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P.,
RA Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman,
RA Ware D., Westhoff P., Mayer K.F., Messing J., Rokhsar D.S.;
RT "The Sorghum bicolor genome and the diversification of grasses.";
RL Nature 457:551-556(2009).
RN [2] {ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=29161754; DOI=10.1111/tpj.13781;
RA McCormick R.F., Truong S.K., Sreedasyam A., Jenkins J., Shu S., Sims D.,
RA Kennedy M., Amirebrahimi M., Weers B.D., McKinley B., Mattison A.,
RA Morishige D.T., Grimwood J., Schmutz J., Mullet J.E.;
RT "The Sorghum bicolor reference genome: improved assembly, gene annotations,
RT a transcriptome atlas, and signatures of genome organization.";
RL Plant J. 93:338-354(2018).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR EMBL; CM000764; EES09137.2; -; Genomic_DNA.
DR AlphaFoldDB; C5Y3H6; -.
DR STRING; 4558.C5Y3H6; -.
DR EnsemblPlants; EES09137; EES09137; SORBI_3005G013800.
DR Gramene; EES09137; EES09137; SORBI_3005G013800.
DR HOGENOM; CLU_087748_0_0_1; -.
DR InParanoid; C5Y3H6; -.
DR OMA; LMHEVIM; -.
DR OrthoDB; 338349at2759; -.
DR Proteomes; UP000000768; Chromosome 5.
DR ExpressionAtlas; C5Y3H6; baseline and differential.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0050896; P:response to stimulus; IEA:UniProt.
DR Gene3D; 2.20.25.80; WRKY domain; 1.
DR InterPro; IPR003657; WRKY_dom.
DR InterPro; IPR036576; WRKY_dom_sf.
DR InterPro; IPR044810; WRKY_plant.
DR PANTHER; PTHR31282:SF121; WRKY DNA-BINDING DOMAIN SUPERFAMILY PROTEIN-RELATED; 1.
DR PANTHER; PTHR31282; WRKY TRANSCRIPTION FACTOR 21-RELATED; 1.
DR Pfam; PF03106; WRKY; 1.
DR SMART; SM00774; WRKY; 1.
DR SUPFAM; SSF118290; WRKY DNA-binding domain; 1.
DR PROSITE; PS50811; WRKY; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000000768};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 124..180
FT /note="WRKY"
FT /evidence="ECO:0000259|PROSITE:PS50811"
SQ SEQUENCE 271 AA; 30678 MW; 156AFD79F71A5185 CRC64;
MMNILESSNL GGYKEVINEV EHQRALMMNL HDLVLPILDP CSGQAKLIQQ LFEEVFSSSG
KIISSLELGD NSEKQAILIK HKGKGGKDNV ENHILEENNK DRGNKRRKNA NHISSVVTQT
PYFDGCHWRK YGQKWISRAK HSRSYYRCAY SKEQGCPATK TVQQKENDGN GTVRLFNVNY
YGQHICNSDG IVHPHVVGAT QDSMPIVSQN QNSSSVFVNT DVHGVQDEIF ESLFMVPDMP
EYLTEFVDVE MARAFEITPM NSPMIPEDIW A
//