ID C5Y5V0_SORBI Unreviewed; 302 AA.
AC C5Y5V0;
DT 01-SEP-2009, integrated into UniProtKB/TrEMBL.
DT 01-SEP-2009, sequence version 1.
DT 24-JAN-2024, entry version 67.
DE RecName: Full=GH18 domain-containing protein {ECO:0000259|PROSITE:PS51910};
GN ORFNames=SORBI_3005G177600 {ECO:0000313|EMBL:EES10056.1};
OS Sorghum bicolor (Sorghum) (Sorghum vulgare).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum.
OX NCBI_TaxID=4558 {ECO:0000313|EMBL:EES10056.1, ECO:0000313|Proteomes:UP000000768};
RN [1] {ECO:0000313|EMBL:EES10056.1, ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=19189423; DOI=10.1038/nature07723;
RA Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J.,
RA Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J.,
RA Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J.,
RA Feltus F.A., Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M.,
RA Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L.,
RA Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P.,
RA Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman,
RA Ware D., Westhoff P., Mayer K.F., Messing J., Rokhsar D.S.;
RT "The Sorghum bicolor genome and the diversification of grasses.";
RL Nature 457:551-556(2009).
RN [2] {ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=29161754; DOI=10.1111/tpj.13781;
RA McCormick R.F., Truong S.K., Sreedasyam A., Jenkins J., Shu S., Sims D.,
RA Kennedy M., Amirebrahimi M., Weers B.D., McKinley B., Mattison A.,
RA Morishige D.T., Grimwood J., Schmutz J., Mullet J.E.;
RT "The Sorghum bicolor reference genome: improved assembly, gene annotations,
RT a transcriptome atlas, and signatures of genome organization.";
RL Plant J. 93:338-354(2018).
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DR EMBL; CM000764; EES10056.1; -; Genomic_DNA.
DR RefSeq; XP_002451068.1; XM_002451023.1.
DR AlphaFoldDB; C5Y5V0; -.
DR STRING; 4558.C5Y5V0; -.
DR EnsemblPlants; EES10056; EES10056; SORBI_3005G177600.
DR GeneID; 8074355; -.
DR Gramene; EES10056; EES10056; SORBI_3005G177600.
DR KEGG; sbi:8074355; -.
DR eggNOG; KOG4701; Eukaryota.
DR HOGENOM; CLU_007818_0_0_1; -.
DR InParanoid; C5Y5V0; -.
DR OMA; LKCTWSD; -.
DR OrthoDB; 884912at2759; -.
DR Proteomes; UP000000768; Chromosome 5.
DR GO; GO:0005576; C:extracellular region; IBA:GO_Central.
DR GO; GO:0004568; F:chitinase activity; IBA:GO_Central.
DR GO; GO:0005975; P:carbohydrate metabolic process; IEA:InterPro.
DR CDD; cd02877; GH18_hevamine_XipI_class_III; 1.
DR Gene3D; 3.20.20.80; Glycosidases; 1.
DR InterPro; IPR045321; Cts1-like.
DR InterPro; IPR001223; Glyco_hydro18_cat.
DR InterPro; IPR017853; Glycoside_hydrolase_SF.
DR PANTHER; PTHR45708; ENDOCHITINASE; 1.
DR PANTHER; PTHR45708:SF11; XYLANASE INHIBITOR PROTEIN XIP; 1.
DR Pfam; PF00704; Glyco_hydro_18; 1.
DR SUPFAM; SSF51445; (Trans)glycosidases; 1.
DR PROSITE; PS51910; GH18_2; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000000768};
KW Signal {ECO:0000256|SAM:SignalP}.
FT SIGNAL 1..28
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 29..302
FT /note="GH18 domain-containing protein"
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5002960042"
FT DOMAIN 33..302
FT /note="GH18"
FT /evidence="ECO:0000259|PROSITE:PS51910"
SQ SEQUENCE 302 AA; 32944 MW; AD6C4309C5ED4869 CRC64;
MAFTRRPSIL LPLALALLSL LASGRTLAAT GPGDIAVFWG RNKAEGTLRE ACDTGTYTTV
IISFLRGFGG HGAYTLDLSG HPLAGVGDDV KHCQSKGILV LLSIAAAGAA ANYSLPSAQS
AADLAAYLWD AYLGGSRPGL RRPFGDDAAL DGVDFYIDQS TSGDHDHYDE LARRLYAYNS
RYHRGRLGVT LTATVRCAYP DRPGVQAALA TGLFSRVHVR LYGDLKCTWS DREAWEKWAA
AYPASRAFVG VVASPEADKD AYMFQKDLYY NVLQFAQKVP NYGGLMIWDR YYDKMNHYIS
SS
//
