ID C5Y703_SORBI Unreviewed; 635 AA.
AC C5Y703;
DT 01-SEP-2009, integrated into UniProtKB/TrEMBL.
DT 01-SEP-2009, sequence version 1.
DT 24-JAN-2024, entry version 67.
DE RecName: Full=F-box domain-containing protein {ECO:0000259|Pfam:PF12937};
GN ORFNames=SORBI_3005G198200 {ECO:0000313|EMBL:EES08900.1};
OS Sorghum bicolor (Sorghum) (Sorghum vulgare).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum.
OX NCBI_TaxID=4558 {ECO:0000313|EMBL:EES08900.1, ECO:0000313|Proteomes:UP000000768};
RN [1] {ECO:0000313|EMBL:EES08900.1, ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=19189423; DOI=10.1038/nature07723;
RA Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J.,
RA Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J.,
RA Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J.,
RA Feltus F.A., Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M.,
RA Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L.,
RA Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P.,
RA Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman,
RA Ware D., Westhoff P., Mayer K.F., Messing J., Rokhsar D.S.;
RT "The Sorghum bicolor genome and the diversification of grasses.";
RL Nature 457:551-556(2009).
RN [2] {ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=29161754; DOI=10.1111/tpj.13781;
RA McCormick R.F., Truong S.K., Sreedasyam A., Jenkins J., Shu S., Sims D.,
RA Kennedy M., Amirebrahimi M., Weers B.D., McKinley B., Mattison A.,
RA Morishige D.T., Grimwood J., Schmutz J., Mullet J.E.;
RT "The Sorghum bicolor reference genome: improved assembly, gene annotations,
RT a transcriptome atlas, and signatures of genome organization.";
RL Plant J. 93:338-354(2018).
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DR EMBL; CM000764; EES08900.1; -; Genomic_DNA.
DR RefSeq; XP_002449912.1; XM_002449867.1.
DR AlphaFoldDB; C5Y703; -.
DR STRING; 4558.C5Y703; -.
DR EnsemblPlants; EES08900; EES08900; SORBI_3005G198200.
DR GeneID; 8079163; -.
DR Gramene; EES08900; EES08900; SORBI_3005G198200.
DR KEGG; sbi:8079163; -.
DR eggNOG; KOG1947; Eukaryota.
DR HOGENOM; CLU_016072_3_0_1; -.
DR InParanoid; C5Y703; -.
DR OrthoDB; 910598at2759; -.
DR Proteomes; UP000000768; Chromosome 5.
DR ExpressionAtlas; C5Y703; baseline and differential.
DR GO; GO:0019005; C:SCF ubiquitin ligase complex; IBA:GO_Central.
DR GO; GO:0031146; P:SCF-dependent proteasomal ubiquitin-dependent protein catabolic process; IBA:GO_Central.
DR CDD; cd22159; F-box_AtTIR1-like; 1.
DR Gene3D; 1.20.1280.50; -; 1.
DR Gene3D; 3.80.10.10; Ribonuclease Inhibitor; 3.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR001810; F-box_dom.
DR InterPro; IPR001611; Leu-rich_rpt.
DR InterPro; IPR006553; Leu-rich_rpt_Cys-con_subtyp.
DR InterPro; IPR032675; LRR_dom_sf.
DR PANTHER; PTHR13318:SF41; F-BOX/LRR-REPEAT PROTEIN 4; 1.
DR PANTHER; PTHR13318; UNCHARACTERIZED; 1.
DR Pfam; PF12937; F-box-like; 1.
DR Pfam; PF13516; LRR_6; 3.
DR SMART; SM00367; LRR_CC; 16.
DR SUPFAM; SSF81383; F-box domain; 1.
DR SUPFAM; SSF52047; RNI-like; 2.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000000768}.
FT DOMAIN 10..43
FT /note="F-box"
FT /evidence="ECO:0000259|Pfam:PF12937"
SQ SEQUENCE 635 AA; 68746 MW; 1B9413598C1C6C93 CRC64;
MRGADLINAA LPDELLDDVI RRVGGAKRDL DACALVCRRW RRLERASRRS ARLAASGDRA
DEVLRLVAER FTALAEVSVD ERLTASAGAA GASGSGPASR SYHRSRMERG PYRAGMIRRR
RRLPLASNLT LHISPFPLDQ PVGDQGSEHS CLTDVGLGHL ARGCTGLEKL SLVWCSAISS
TGLVRIAEHC KKLTSLDLQA CFIGDPGLTA IGVGCKLLRK LNLRFVEGTT DEGLIGLVKN
CGQSLVSLAV ANCQWLTDAS LYAVGSHCPN LEILSVESDC VRSFGIISVA KGCRQLKTLK
LQCIGAGDDA LDAVGSFCPL LEILSLNNFE GFTDRSLTSI AKGCKNLTDL VLNECHLLTD
RSLEFVARSC KKLARLKISG CQNMESVALE HIGRWCPGLL ELSLIFCPRI QNSAFLEIGR
GCSLLRTLFL VDCSRISDSA LSHIAQGCKN LTELSIRRGY EVGDRALLSI AENCKSLREL
TLQFCERVSD AGLSAIAENC PLQKLNLCGC HLITDSGLTA IARGCPDLVF LDISVLRIIS
DIALAEIADG CPKLKEIALS HCPDVTNVGL DHLVRGCLQL ESCQMVYCRR ITSSGVATIV
SGCTRLKKLL VEEWKVSERT RRRAGPVLSF LCTGL
//