ID C5YCL4_SORBI Unreviewed; 766 AA.
AC C5YCL4;
DT 01-SEP-2009, integrated into UniProtKB/TrEMBL.
DT 01-SEP-2009, sequence version 1.
DT 27-MAR-2024, entry version 79.
DE RecName: Full=Fibronectin type III-like domain-containing protein {ECO:0000259|SMART:SM01217};
GN ORFNames=SORBI_3006G157700 {ECO:0000313|EMBL:EES12553.1};
OS Sorghum bicolor (Sorghum) (Sorghum vulgare).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum.
OX NCBI_TaxID=4558 {ECO:0000313|EMBL:EES12553.1, ECO:0000313|Proteomes:UP000000768};
RN [1] {ECO:0000313|EMBL:EES12553.1, ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=19189423; DOI=10.1038/nature07723;
RA Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J.,
RA Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J.,
RA Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J.,
RA Feltus F.A., Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M.,
RA Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L.,
RA Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P.,
RA Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman,
RA Ware D., Westhoff P., Mayer K.F., Messing J., Rokhsar D.S.;
RT "The Sorghum bicolor genome and the diversification of grasses.";
RL Nature 457:551-556(2009).
RN [2] {ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=29161754; DOI=10.1111/tpj.13781;
RA McCormick R.F., Truong S.K., Sreedasyam A., Jenkins J., Shu S., Sims D.,
RA Kennedy M., Amirebrahimi M., Weers B.D., McKinley B., Mattison A.,
RA Morishige D.T., Grimwood J., Schmutz J., Mullet J.E.;
RT "The Sorghum bicolor reference genome: improved assembly, gene annotations,
RT a transcriptome atlas, and signatures of genome organization.";
RL Plant J. 93:338-354(2018).
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DR EMBL; CM000765; EES12553.1; -; Genomic_DNA.
DR RefSeq; XP_002448225.1; XM_002448180.1.
DR AlphaFoldDB; C5YCL4; -.
DR EnsemblPlants; EES12553; EES12553; SORBI_3006G157700.
DR GeneID; 8056043; -.
DR Gramene; EES12553; EES12553; SORBI_3006G157700.
DR KEGG; sbi:8056043; -.
DR eggNOG; ENOG502QQ55; Eukaryota.
DR HOGENOM; CLU_004542_5_3_1; -.
DR InParanoid; C5YCL4; -.
DR OMA; HMAIGTT; -.
DR OrthoDB; 2963694at2759; -.
DR Proteomes; UP000000768; Chromosome 6.
DR GO; GO:0005576; C:extracellular region; IEA:UniProtKB-KW.
DR GO; GO:0005773; C:vacuole; IEA:EnsemblPlants.
DR GO; GO:0046556; F:alpha-L-arabinofuranosidase activity; IBA:GO_Central.
DR GO; GO:0009044; F:xylan 1,4-beta-xylosidase activity; IBA:GO_Central.
DR GO; GO:0031222; P:arabinan catabolic process; IBA:GO_Central.
DR GO; GO:0045493; P:xylan catabolic process; IBA:GO_Central.
DR Gene3D; 3.40.50.1700; Glycoside hydrolase family 3 C-terminal domain; 1.
DR Gene3D; 3.20.20.300; Glycoside hydrolase, family 3, N-terminal domain; 1.
DR Gene3D; 2.60.40.10; Immunoglobulins; 1.
DR InterPro; IPR044993; BXL.
DR InterPro; IPR026891; Fn3-like.
DR InterPro; IPR002772; Glyco_hydro_3_C.
DR InterPro; IPR036881; Glyco_hydro_3_C_sf.
DR InterPro; IPR001764; Glyco_hydro_3_N.
DR InterPro; IPR036962; Glyco_hydro_3_N_sf.
DR InterPro; IPR017853; Glycoside_hydrolase_SF.
DR InterPro; IPR013783; Ig-like_fold.
DR PANTHER; PTHR42721:SF1; BETA-D-XYLOSIDASE 6-RELATED; 1.
DR PANTHER; PTHR42721; SUGAR HYDROLASE-RELATED; 1.
DR Pfam; PF14310; Fn3-like; 1.
DR Pfam; PF00933; Glyco_hydro_3; 1.
DR Pfam; PF01915; Glyco_hydro_3_C; 1.
DR PRINTS; PR00133; GLHYDRLASE3.
DR SMART; SM01217; Fn3_like; 1.
DR SUPFAM; SSF51445; (Trans)glycosidases; 1.
DR SUPFAM; SSF52279; Beta-D-glucan exohydrolase, C-terminal domain; 1.
PE 4: Predicted;
KW Glycosidase {ECO:0000256|ARBA:ARBA00023295};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Reference proteome {ECO:0000313|Proteomes:UP000000768};
KW Secreted {ECO:0000256|ARBA:ARBA00022525};
KW Signal {ECO:0000256|ARBA:ARBA00022729, ECO:0000256|SAM:SignalP}.
FT SIGNAL 1..19
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 20..766
FT /note="Fibronectin type III-like domain-containing protein"
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5002956948"
FT DOMAIN 689..759
FT /note="Fibronectin type III-like"
FT /evidence="ECO:0000259|SMART:SM01217"
SQ SEQUENCE 766 AA; 83005 MW; 157322EC01322A37 CRC64;
MPLALLLCLL ACGAAGAAAT ARPCASPYSG SSAYPFCDAS LSIPARARAL VSLLTLDEKI
AQLSNTAGGV PRLGIPPYQW WSESLHGLAD NGPGVNFSSG PVRAATTFPQ VILSTAAFNR
SLWRAVAEAV ATEALGMHNA GQAGLTYWAP NINIFRDPRW GRGQETSGED PAVAAAYSLE
YVKGFQGEQG EEGRIRLSAC CKHYTAYDME KWEGFSRYTF NAKVNAQDLE DTYQPPFKTC
IQEARASCLM CAYNQVNGVP MCANKDLLQK TRDEWGFQGY ITSDCDAVAI IHENQTYTKS
DEDSIAIVLK AGMDINCGSF LVRHTKSAVE KGKVQEQDID RALFNLFSVQ LRLGIFDKPN
NNQWSTQLGP NNVCTKEHRE LAAEAVRQGA VLLKNDHSFL PLKRSEVRHV AIIGPSANDV
YAMGGDYTGV ACNPTTFLKG IQAYATQTTF AAGCKDVSCN STELFGEAIA AAKRADIVVV
VAGLNLTEER EDFDRVSLLL PGKQMSLIHA VASVAKKPLV LVLLGGGPVD VSFAKQDPRI
ASILWLGYPG EVGGQVLPEI LFGEYNPGGK LAMTWYPESF TAIPMTDMNM RADPSRGYPG
RTYRFYTGDV VYGFGYGLSY SKYSYSILSA PKKITMSRSS VLDIISRKPS YIRRDGLDFV
KTEDIASCEA LAFSVHVAVS NHGSMDGSHA VLLFARSKSS VPGFPIKQLV GFERVHTAAG
SASNVEISVD PCKHMSAANP EGKRVLLLGD HVLTVGDEEF ELFIEL
//
