ID C5YKD9_SORBI Unreviewed; 569 AA.
AC C5YKD9;
DT 01-SEP-2009, integrated into UniProtKB/TrEMBL.
DT 01-SEP-2009, sequence version 1.
DT 27-MAR-2024, entry version 71.
DE RecName: Full=WRKY domain-containing protein {ECO:0000259|PROSITE:PS50811};
GN ORFNames=SORBI_3007G111600 {ECO:0000313|EMBL:EES14907.1};
OS Sorghum bicolor (Sorghum) (Sorghum vulgare).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum.
OX NCBI_TaxID=4558 {ECO:0000313|EMBL:EES14907.1, ECO:0000313|Proteomes:UP000000768};
RN [1] {ECO:0000313|EMBL:EES14907.1, ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=19189423; DOI=10.1038/nature07723;
RA Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J.,
RA Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J.,
RA Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J.,
RA Feltus F.A., Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M.,
RA Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L.,
RA Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P.,
RA Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman,
RA Ware D., Westhoff P., Mayer K.F., Messing J., Rokhsar D.S.;
RT "The Sorghum bicolor genome and the diversification of grasses.";
RL Nature 457:551-556(2009).
RN [2] {ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=29161754; DOI=10.1111/tpj.13781;
RA McCormick R.F., Truong S.K., Sreedasyam A., Jenkins J., Shu S., Sims D.,
RA Kennedy M., Amirebrahimi M., Weers B.D., McKinley B., Mattison A.,
RA Morishige D.T., Grimwood J., Schmutz J., Mullet J.E.;
RT "The Sorghum bicolor reference genome: improved assembly, gene annotations,
RT a transcriptome atlas, and signatures of genome organization.";
RL Plant J. 93:338-354(2018).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR EMBL; CM000766; EES14907.1; -; Genomic_DNA.
DR RefSeq; XP_002445412.1; XM_002445367.1.
DR AlphaFoldDB; C5YKD9; -.
DR STRING; 4558.C5YKD9; -.
DR EnsemblPlants; EES14907; EES14907; SORBI_3007G111600.
DR GeneID; 8071033; -.
DR Gramene; EES14907; EES14907; SORBI_3007G111600.
DR KEGG; sbi:8071033; -.
DR eggNOG; ENOG502QSNR; Eukaryota.
DR HOGENOM; CLU_034997_1_0_1; -.
DR InParanoid; C5YKD9; -.
DR OMA; TSDGYRW; -.
DR OrthoDB; 5478560at2759; -.
DR Proteomes; UP000000768; Chromosome 7.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0050896; P:response to stimulus; IEA:UniProt.
DR Gene3D; 2.20.25.80; WRKY domain; 2.
DR InterPro; IPR003657; WRKY_dom.
DR InterPro; IPR036576; WRKY_dom_sf.
DR InterPro; IPR044810; WRKY_plant.
DR PANTHER; PTHR31221:SF309; WRKY DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR31221; WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED; 1.
DR Pfam; PF03106; WRKY; 2.
DR SMART; SM00774; WRKY; 2.
DR SUPFAM; SSF118290; WRKY DNA-binding domain; 2.
DR PROSITE; PS50811; WRKY; 2.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000000768}.
FT DOMAIN 247..311
FT /note="WRKY"
FT /evidence="ECO:0000259|PROSITE:PS50811"
FT DOMAIN 414..479
FT /note="WRKY"
FT /evidence="ECO:0000259|PROSITE:PS50811"
FT REGION 1..114
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 474..533
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 36..58
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 83..114
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 481..517
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 569 AA; 61781 MW; 7F58761D18CD8B24 CRC64;
MADGDPAPAL ALANEKLPAP AAADVDETRP APPLEPSRGP DEEKRPLEEE EAEVEAHPPR
EPTGAPPVDR LGMEVVAAAE ADMKANEVEK ERGDRAKEKR EKDKGKGKEG KEKEKVEEEA
KLKVTAVVKV EGTEKEVKVT RPPAGASAET PILAVPVVAV PCFIAPPGFA GQFAMTHQAA
LASVTAQAQM HLQSPTSSAC SEVPSSPFYM TPRSLVPLQQ SPSVTEGNIC KPIADKSFSS
DSKSHHVVVN MVADGFNWRK YGQKQVKSSD NSRSYYRCTN SGCLAKKKVE HFPDGRVVEI
IYRGAHNHEP PQKTRFAKER VTPIGVPSGG ETLRLVNTEI VESSTPTCKL EQSAISETSE
QHLFCSSDCE GDAGNKSENE HPSAEPLPKR RTLETTAPNL TPVLRTVREQ KIIVQAGKMS
DGYRWRKYGQ KIVKGNPNPR SYYRCTHGGC PVRKHVEKAP DDVNNIVVTY EGKHNHDEPF
RSSSIPVSAI SPSATTTEQP NTSTTSDEKP PTITQKDANS ESDKETTLEF GGEKALESAQ
TLLSIKTNSD DMKNSVLKET SAAVQVQNS
//
