ID C5YKS9_SORBI Unreviewed; 267 AA.
AC C5YKS9;
DT 01-SEP-2009, integrated into UniProtKB/TrEMBL.
DT 01-SEP-2009, sequence version 1.
DT 24-JAN-2024, entry version 58.
DE RecName: Full=DC1 domain-containing protein {ECO:0000259|Pfam:PF03107};
GN ORFNames=SORBI_3007G123300 {ECO:0000313|EMBL:EES14967.1};
OS Sorghum bicolor (Sorghum) (Sorghum vulgare).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum.
OX NCBI_TaxID=4558 {ECO:0000313|EMBL:EES14967.1, ECO:0000313|Proteomes:UP000000768};
RN [1] {ECO:0000313|EMBL:EES14967.1, ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=19189423; DOI=10.1038/nature07723;
RA Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J.,
RA Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J.,
RA Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J.,
RA Feltus F.A., Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M.,
RA Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L.,
RA Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P.,
RA Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman,
RA Ware D., Westhoff P., Mayer K.F., Messing J., Rokhsar D.S.;
RT "The Sorghum bicolor genome and the diversification of grasses.";
RL Nature 457:551-556(2009).
RN [2] {ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=29161754; DOI=10.1111/tpj.13781;
RA McCormick R.F., Truong S.K., Sreedasyam A., Jenkins J., Shu S., Sims D.,
RA Kennedy M., Amirebrahimi M., Weers B.D., McKinley B., Mattison A.,
RA Morishige D.T., Grimwood J., Schmutz J., Mullet J.E.;
RT "The Sorghum bicolor reference genome: improved assembly, gene annotations,
RT a transcriptome atlas, and signatures of genome organization.";
RL Plant J. 93:338-354(2018).
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; CM000766; EES14967.1; -; Genomic_DNA.
DR RefSeq; XP_002445472.1; XM_002445427.1.
DR AlphaFoldDB; C5YKS9; -.
DR STRING; 4558.C5YKS9; -.
DR EnsemblPlants; EES14967; EES14967; SORBI_3007G123300.
DR GeneID; 8070063; -.
DR Gramene; EES14967; EES14967; SORBI_3007G123300.
DR KEGG; sbi:8070063; -.
DR eggNOG; ENOG502QUAU; Eukaryota.
DR HOGENOM; CLU_056082_1_0_1; -.
DR InParanoid; C5YKS9; -.
DR OMA; WEAACED; -.
DR OrthoDB; 333694at2759; -.
DR Proteomes; UP000000768; Chromosome 7.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR Gene3D; 3.30.60.90; -; 1.
DR InterPro; IPR046349; C1-like_sf.
DR InterPro; IPR004146; DC1.
DR InterPro; IPR043145; Znf_ZZ_sf.
DR PANTHER; PTHR46477; CYSTEINE/HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN; 1.
DR PANTHER; PTHR46477:SF16; OS08G0404500 PROTEIN; 1.
DR Pfam; PF03107; C1_2; 1.
DR SUPFAM; SSF57889; Cysteine-rich domain; 2.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000000768};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771}.
FT TRANSMEM 237..263
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 17..69
FT /note="DC1"
FT /evidence="ECO:0000259|Pfam:PF03107"
SQ SEQUENCE 267 AA; 29371 MW; 2BE1060B65704BCF CRC64;
MTKLFEDPPP EIAHTAHPAH KLKLVTSDDA HAAPFKCDGC NEPGNGPRYT CDDCGSSHSR
RFDLHTRCAL AESRKDTIEH PLFRNRVFKF RQQPPPPVNG TICDACGEPA HGFVYHCSEK
NKGGGGLDLH PCCATLPERI CKDGHALVLR PSTSRRCCIC GHRDDGRYWA YRFEGEDGVD
DMHVACLKKT AYQIWETAYE NQYHSGGAQN LHVGLTDIDG LLQICKNSQT SGGLDQFIRI
AGSVASIIIA IIFANPAALI SAIPKKY
//
