ID C5Z3B4_SORBI Unreviewed; 303 AA.
AC C5Z3B4;
DT 01-SEP-2009, integrated into UniProtKB/TrEMBL.
DT 01-SEP-2009, sequence version 1.
DT 24-JAN-2024, entry version 58.
DE RecName: Full=Cell cycle checkpoint protein RAD1 {ECO:0008006|Google:ProtNLM};
GN ORFNames=SORBI_3010G021900 {ECO:0000313|EMBL:EER87779.1};
OS Sorghum bicolor (Sorghum) (Sorghum vulgare).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum.
OX NCBI_TaxID=4558 {ECO:0000313|EMBL:EER87779.1, ECO:0000313|Proteomes:UP000000768};
RN [1] {ECO:0000313|EMBL:EER87779.1, ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=19189423; DOI=10.1038/nature07723;
RA Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J.,
RA Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J.,
RA Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J.,
RA Feltus F.A., Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M.,
RA Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L.,
RA Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P.,
RA Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman,
RA Ware D., Westhoff P., Mayer K.F., Messing J., Rokhsar D.S.;
RT "The Sorghum bicolor genome and the diversification of grasses.";
RL Nature 457:551-556(2009).
RN [2] {ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=29161754; DOI=10.1111/tpj.13781;
RA McCormick R.F., Truong S.K., Sreedasyam A., Jenkins J., Shu S., Sims D.,
RA Kennedy M., Amirebrahimi M., Weers B.D., McKinley B., Mattison A.,
RA Morishige D.T., Grimwood J., Schmutz J., Mullet J.E.;
RT "The Sorghum bicolor reference genome: improved assembly, gene annotations,
RT a transcriptome atlas, and signatures of genome organization.";
RL Plant J. 93:338-354(2018).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the rad1 family.
CC {ECO:0000256|ARBA:ARBA00010991}.
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DR EMBL; CM000769; EER87779.1; -; Genomic_DNA.
DR RefSeq; XP_002436412.1; XM_002436367.1.
DR AlphaFoldDB; C5Z3B4; -.
DR STRING; 4558.C5Z3B4; -.
DR EnsemblPlants; EER87779; EER87779; SORBI_3010G021900.
DR GeneID; 8068389; -.
DR Gramene; EER87779; EER87779; SORBI_3010G021900.
DR KEGG; sbi:8068389; -.
DR eggNOG; KOG0017; Eukaryota.
DR HOGENOM; CLU_079504_0_0_1; -.
DR InParanoid; C5Z3B4; -.
DR OMA; TIEIRYP; -.
DR OrthoDB; 1215972at2759; -.
DR Proteomes; UP000000768; Chromosome 10.
DR GO; GO:0030896; C:checkpoint clamp complex; IBA:GO_Central.
DR GO; GO:0000077; P:DNA damage checkpoint signaling; IBA:GO_Central.
DR GO; GO:0006281; P:DNA repair; IBA:GO_Central.
DR CDD; cd00577; PCNA; 1.
DR Gene3D; 3.70.10.10; -; 1.
DR InterPro; IPR046938; DNA_clamp_sf.
DR InterPro; IPR003021; Rad1_Rec1_Rad17.
DR PANTHER; PTHR10870; CELL CYCLE CHECKPOINT PROTEIN RAD1; 1.
DR PANTHER; PTHR10870:SF0; CELL CYCLE CHECKPOINT PROTEIN RAD1; 1.
DR Pfam; PF02144; Rad1; 1.
DR SUPFAM; SSF55979; DNA clamp; 1.
PE 3: Inferred from homology;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000000768}.
SQ SEQUENCE 303 AA; 33959 MW; 2A76A4B8006CAAA5 CRC64;
MSSSTSVRDD DAPDLVCQID CVHGMVDALS CVRWKRHQDA VMELSEHGIV LSVEESGCLQ
GKVFLKRELF VEYDYGGDGR QRFGLSLGLF VDCLNIFSSP GHASAVEIRY PGPDMQLLLK
SVGSPDACLY AEIRTRIPDT VSWDYHFEHD GNTPVTFTAK SAVLKETTDD LEWPGSSIQI
RMQPDPPTVI LKGEGHGDLQ IEFPYYANTD LLIAFQCDHE VSYRYKYKFL RATTSNIPST
VMKENRRTKV SIGRGGMLKI QHLVSLARPG MPYFRNIGGG TEQTSRIAHI EFFVKPEEDD
NDA
//
