ID C5Z971_SORBI Unreviewed; 503 AA.
AC C5Z971;
DT 01-SEP-2009, integrated into UniProtKB/TrEMBL.
DT 01-SEP-2009, sequence version 1.
DT 27-MAR-2024, entry version 67.
DE RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=SORBI_3010G252100 {ECO:0000313|EMBL:EER90329.1};
OS Sorghum bicolor (Sorghum) (Sorghum vulgare).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum.
OX NCBI_TaxID=4558 {ECO:0000313|EMBL:EER90329.1, ECO:0000313|Proteomes:UP000000768};
RN [1] {ECO:0000313|EMBL:EER90329.1, ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=19189423; DOI=10.1038/nature07723;
RA Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J.,
RA Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J.,
RA Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J.,
RA Feltus F.A., Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M.,
RA Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L.,
RA Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P.,
RA Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman,
RA Ware D., Westhoff P., Mayer K.F., Messing J., Rokhsar D.S.;
RT "The Sorghum bicolor genome and the diversification of grasses.";
RL Nature 457:551-556(2009).
RN [2] {ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=29161754; DOI=10.1111/tpj.13781;
RA McCormick R.F., Truong S.K., Sreedasyam A., Jenkins J., Shu S., Sims D.,
RA Kennedy M., Amirebrahimi M., Weers B.D., McKinley B., Mattison A.,
RA Morishige D.T., Grimwood J., Schmutz J., Mullet J.E.;
RT "The Sorghum bicolor reference genome: improved assembly, gene annotations,
RT a transcriptome atlas, and signatures of genome organization.";
RL Plant J. 93:338-354(2018).
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC {ECO:0000256|ARBA:ARBA00007626}.
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DR EMBL; CM000769; EER90329.1; -; Genomic_DNA.
DR RefSeq; XP_002438962.1; XM_002438917.1.
DR AlphaFoldDB; C5Z971; -.
DR EnsemblPlants; EER90329; EER90329; SORBI_3010G252100.
DR GeneID; 8065573; -.
DR Gramene; EER90329; EER90329; SORBI_3010G252100.
DR KEGG; sbi:8065573; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_019802_3_0_1; -.
DR InParanoid; C5Z971; -.
DR OMA; IFSYRIC; -.
DR OrthoDB; 453430at2759; -.
DR Proteomes; UP000000768; Chromosome 10.
DR GO; GO:0005739; C:mitochondrion; IBA:GO_Central.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 2.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 2.
DR PANTHER; PTHR45717:SF20; OS07G0598500 PROTEIN; 1.
DR PANTHER; PTHR45717; OS12G0527900 PROTEIN; 1.
DR Pfam; PF01535; PPR; 1.
DR Pfam; PF13812; PPR_3; 1.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS51375; PPR; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000000768};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transit peptide {ECO:0000256|ARBA:ARBA00022946}.
FT REPEAT 362..396
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REGION 27..51
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 477..503
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 478..503
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 503 AA; 56651 MW; A57B3AC743F17592 CRC64;
MASSSLFAAA RRLLSIGRRG GLLPVPPSRA VASSSRSNRA EEGTPPARPP TLWSTLCPLG
KPGTLLVPEI ELWAARSGKR LRPCELHFVV KDLRRRHRHR QALEVSEWMN LKGHVKFLPK
DHAVHLDLIG HIHGVGAAET YFNNLSDKDK TEKPYGALLY CYTRECLVDK ALAHFQKMKE
LGFVFTPLPY SNLMILYANV EQHERVPSVM AEMKSNGIVP NNFSYNICIN AYGTRADFSG
LENTLEEMEF ASQVVVDWRT YADVASHYIK GDLREKAYSA LQKAEAKMDE KDSFAYSHLI
SLYGHLGDKS EIKRLWVLQM LKCKGCINKG YKYMLTVLVK LDEIAEAEDL LKKWESSKNE
FDFKVPNILL KGYCQWGLLD KAEALLDGFL RKGKKPSATS WAIVASAYAE KGDVPRAYEL
TKRALSMCVP DSGWIPEPSM IEVILKYLGD EGEVKDVEAF IDLLKVVVPM NSDMTEALSR
ARSREEKKKA EETTEAPRED STA
//
