ID C6JJ47_FUSVA Unreviewed; 569 AA.
AC C6JJ47;
DT 01-SEP-2009, integrated into UniProtKB/TrEMBL.
DT 01-SEP-2009, sequence version 1.
DT 27-MAR-2024, entry version 75.
DE SubName: Full=Sigma-54 interaction domain protein {ECO:0000313|EMBL:EES64665.1};
GN ORFNames=FVAG_01348 {ECO:0000313|EMBL:EES64665.1};
OS Fusobacterium varium ATCC 27725.
OC Bacteria; Fusobacteriota; Fusobacteriia; Fusobacteriales; Fusobacteriaceae;
OC Fusobacterium.
OX NCBI_TaxID=469618 {ECO:0000313|EMBL:EES64665.1, ECO:0000313|Proteomes:UP000004505};
RN [1] {ECO:0000313|EMBL:EES64665.1, ECO:0000313|Proteomes:UP000004505}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 27725 {ECO:0000313|EMBL:EES64665.1,
RC ECO:0000313|Proteomes:UP000004505};
RG The Broad Institute Genome Sequencing Platform;
RA Earl A., Ward D., Feldgarden M., Gevers D., Strauss J., Ambrose C.E.,
RA Allen-Vercoe E., Young S.K., Zeng Q., Gargeya S., Fitzgerald M., Haas B.,
RA Abouelleil A., Alvarado L., Arachchi H.M., Berlin A., Brown A.,
RA Chapman S.B., Chen Z., Dunbar C., Freedman E., Gearin G., Gellesch M.,
RA Goldberg J., Griggs A., Gujja S., Heiman D., Howarth C., Larson L., Lui A.,
RA MacDonald P.J.P., Mehta T., Montmayeur A., Murphy C., Neiman D.,
RA Pearson M., Priest M., Roberts A., Saif S., Shea T., Shenoy N., Sisk P.,
RA Stolte C., Sykes S., Wortman J., Nusbaum C., Birren B.;
RT "The Genome Sequence of Fusobacterium varium ATCC 27725.";
RL Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EES64665.1}.
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DR EMBL; ACIE02000015; EES64665.1; -; Genomic_DNA.
DR RefSeq; WP_005949006.1; NZ_GL987996.1.
DR AlphaFoldDB; C6JJ47; -.
DR STRING; 469618.FVAG_01348; -.
DR GeneID; 77467001; -.
DR eggNOG; COG3829; Bacteria.
DR HOGENOM; CLU_000445_8_1_0; -.
DR Proteomes; UP000004505; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR002197; HTH_Fis.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR002078; Sigma_54_int.
DR InterPro; IPR025943; Sigma_54_int_dom_ATP-bd_2.
DR InterPro; IPR025944; Sigma_54_int_dom_CS.
DR PANTHER; PTHR32071:SF119; SIGMA-54 INTERACTING PROTEIN; 1.
DR PANTHER; PTHR32071; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR Pfam; PF02954; HTH_8; 1.
DR Pfam; PF00158; Sigma54_activat; 1.
DR SMART; SM00382; AAA; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS00676; SIGMA54_INTERACT_2; 1.
DR PROSITE; PS00688; SIGMA54_INTERACT_3; 1.
DR PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000004505};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 264..494
FT /note="Sigma-54 factor interaction"
FT /evidence="ECO:0000259|PROSITE:PS50045"
SQ SEQUENCE 569 AA; 64873 MW; B817EA3336620413 CRC64;
MDLLNKVKGD ISKYAETISQ VINIDVEIMS KDLIRIAGTG RLKEKVGLDM TGESHVYEHV
LTTGNTEIIL SPREEKICQT CPSKYTCTEV LEISTPVMFN SEPIGVIGLI CFDEKQKEEF
ILKKDSYIKF LQQIALFISS RVYEANEKIM IENNNKVLMN IVDRIPDSII ITNENDKIEL
INEKGIALFK LTDYEHKLIV SPIKNFLDKK EFSLSYADIS HDVVGDIIYF PKNMGRFRTL
YIFQESEKFK TYLHQLNYNF SKEFIFNSQE MEAVYSKIRK VAKTTSTVLI TGESGTGKEV
AAKAIHMNSN RADMPLVAVN CGAIPDTLME SEFFGYVKGA FTGANPKGKV GFFEQADKGT
IFLDEIGDMP LPLQVKLLRV LQEKTISPVG SDKVKEIDIR IIAATNKNLE ALVAEGKFRE
DLYYRLNVFP IDIPPLRERP KDIEDLTNFF IAKYSQLFNI PIRSLSNEVM SIFLSYSWPG
NIRELKNITE YIINVIEERD LMITVKHLPP KLTNSLNIKE IKTLAEIEKE AIETLLLKYG
HSSKDKIKVA NTLDISLATL YRKLKLYNL
//
