ID C6Y308_PEDHD Unreviewed; 566 AA.
AC C6Y308;
DT 22-SEP-2009, integrated into UniProtKB/TrEMBL.
DT 22-SEP-2009, sequence version 1.
DT 27-MAR-2024, entry version 66.
DE SubName: Full=Amino acid permease-associated region {ECO:0000313|EMBL:ACU03221.1};
GN OrderedLocusNames=Phep_1000 {ECO:0000313|EMBL:ACU03221.1};
OS Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / CIP 104194 / JCM 7457
OS / NBRC 12017 / NCIMB 9290 / NRRL B-14731 / HIM 762-3).
OC Bacteria; Bacteroidota; Sphingobacteriia; Sphingobacteriales;
OC Sphingobacteriaceae; Pedobacter.
OX NCBI_TaxID=485917 {ECO:0000313|EMBL:ACU03221.1, ECO:0000313|Proteomes:UP000000852};
RN [1] {ECO:0000313|EMBL:ACU03221.1, ECO:0000313|Proteomes:UP000000852}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 13125 / DSM 2366 / CIP 104194 / JCM 7457 / NBRC 12017 /
RC NCIMB 9290 / NRRL B-14731 / HIM 762-3
RC {ECO:0000313|Proteomes:UP000000852};
RX PubMed=21304637; DOI=10.4056/sigs.22138;
RA Han C., Spring S., Lapidus A., Del Rio T.G., Tice H., Copeland A.,
RA Cheng J.F., Lucas S., Chen F., Nolan M., Bruce D., Goodwin L., Pitluck S.,
RA Ivanova N., Mavromatis K., Mikhailova N., Pati A., Chen A., Palaniappan K.,
RA Land M., Hauser L., Chang Y.J., Jeffries C.C., Saunders E., Chertkov O.,
RA Brettin T., Goker M., Rohde M., Bristow J., Eisen J.A., Markowitz V.,
RA Hugenholtz P., Kyrpides N.C., Klenk H.P., Detter J.C.;
RT "Complete genome sequence of Pedobacter heparinus type strain (HIM 762-
RT 3).";
RL Stand. Genomic Sci. 1:54-62(2009).
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-
CC pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
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DR EMBL; CP001681; ACU03221.1; -; Genomic_DNA.
DR RefSeq; WP_012781165.1; NZ_AQGK01000003.1.
DR AlphaFoldDB; C6Y308; -.
DR STRING; 485917.Phep_1000; -.
DR KEGG; phe:Phep_1000; -.
DR eggNOG; COG0531; Bacteria.
DR HOGENOM; CLU_007946_15_7_10; -.
DR OrthoDB; 9762947at2; -.
DR Proteomes; UP000000852; Chromosome.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0022857; F:transmembrane transporter activity; IEA:InterPro.
DR Gene3D; 1.20.1740.10; Amino acid/polyamine transporter I; 1.
DR InterPro; IPR002293; AA/rel_permease1.
DR PANTHER; PTHR43243; INNER MEMBRANE TRANSPORTER YGJI-RELATED; 1.
DR PANTHER; PTHR43243:SF4; LD37241P; 1.
DR Pfam; PF13520; AA_permease_2; 1.
DR PIRSF; PIRSF006060; AA_transporter; 2.
PE 4: Predicted;
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000000852};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW ECO:0000256|SAM:Phobius}.
FT TRANSMEM 31..53
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 59..81
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 102..126
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 160..181
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 188..213
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 233..253
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 274..294
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 338..357
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 390..408
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 414..431
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 443..463
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 469..486
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 507..525
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 537..554
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
SQ SEQUENCE 566 AA; 60983 MW; 046CFF673EAC5C21 CRC64;
MNFRKSIDLL TKEAAESGEG TLKRTLGPVN LVALGIGAII GAGLFSITGS AAANNAGPAI
TISFIIAALG CGFAGLCYAE FASMIPVAGS AYTYSYATMG EFVAWVIGWD LVLEYALGAA
TVSISWSRYL VKFLAYYDIH LPAQVTMSPF EHATLLDGTV VSGMFNLPAV FIIVIMSFVL
IRGTSESAFV NGLIVAIKVV IVFIFIFLGW KYINADNYSP YFIPADKPGH ESVFTHGWGG
VIRAAGIVFF AYIGFDAVST AAQEAKNPKK DMPIGILVSL FICTILYILF AHVMTGVANY
DMFKGQDGIA PVAVAIDNMG TKDAAGIVTP AYPWLNKLII LAILGGYASV ILVMLLGQSR
VFFSMSKDGL LPKVFSKVHH KYSTPAKSNL LFMVFVSLFA AFVPATVVGE MTSIGTLLAF
ILVCIGVVIL RKRMPDLPRA FKVPMVPLIP ILGIAVCLGM MVFLPLDTWV RLLVWMIIGI
NVYLFYGMRN SLLSDNNQLT LAKSTKTVSY IGFALAILLI IVAIIHHHIT DGADTGLYYF
SLVFAAAHLI LYVVKAATSG QVKAKQ
//
