ID C6Y392_PEDHD Unreviewed; 105 AA.
AC C6Y392;
DT 22-SEP-2009, integrated into UniProtKB/TrEMBL.
DT 22-SEP-2009, sequence version 1.
DT 24-JAN-2024, entry version 61.
DE SubName: Full=Helix-turn-helix domain protein {ECO:0000313|EMBL:ACU05317.1};
GN OrderedLocusNames=Phep_3121 {ECO:0000313|EMBL:ACU05317.1};
OS Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / CIP 104194 / JCM 7457
OS / NBRC 12017 / NCIMB 9290 / NRRL B-14731 / HIM 762-3).
OC Bacteria; Bacteroidota; Sphingobacteriia; Sphingobacteriales;
OC Sphingobacteriaceae; Pedobacter.
OX NCBI_TaxID=485917 {ECO:0000313|EMBL:ACU05317.1, ECO:0000313|Proteomes:UP000000852};
RN [1] {ECO:0000313|EMBL:ACU05317.1, ECO:0000313|Proteomes:UP000000852}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 13125 / DSM 2366 / CIP 104194 / JCM 7457 / NBRC 12017 /
RC NCIMB 9290 / NRRL B-14731 / HIM 762-3
RC {ECO:0000313|Proteomes:UP000000852};
RX PubMed=21304637; DOI=10.4056/sigs.22138;
RA Han C., Spring S., Lapidus A., Del Rio T.G., Tice H., Copeland A.,
RA Cheng J.F., Lucas S., Chen F., Nolan M., Bruce D., Goodwin L., Pitluck S.,
RA Ivanova N., Mavromatis K., Mikhailova N., Pati A., Chen A., Palaniappan K.,
RA Land M., Hauser L., Chang Y.J., Jeffries C.C., Saunders E., Chertkov O.,
RA Brettin T., Goker M., Rohde M., Bristow J., Eisen J.A., Markowitz V.,
RA Hugenholtz P., Kyrpides N.C., Klenk H.P., Detter J.C.;
RT "Complete genome sequence of Pedobacter heparinus type strain (HIM 762-
RT 3).";
RL Stand. Genomic Sci. 1:54-62(2009).
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DR EMBL; CP001681; ACU05317.1; -; Genomic_DNA.
DR RefSeq; WP_015808926.1; NZ_AQGK01000001.1.
DR AlphaFoldDB; C6Y392; -.
DR STRING; 485917.Phep_3121; -.
DR KEGG; phe:Phep_3121; -.
DR eggNOG; COG1396; Bacteria.
DR HOGENOM; CLU_066192_17_7_10; -.
DR OrthoDB; 7859381at2; -.
DR Proteomes; UP000000852; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR CDD; cd00093; HTH_XRE; 1.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR InterPro; IPR001387; Cro/C1-type_HTH.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR Pfam; PF01381; HTH_3; 1.
DR SMART; SM00530; HTH_XRE; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR PROSITE; PS50943; HTH_CROC1; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000000852}.
FT DOMAIN 9..63
FT /note="HTH cro/C1-type"
FT /evidence="ECO:0000259|PROSITE:PS50943"
FT COILED 70..97
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 105 AA; 12038 MW; AA2102451E9CA04B CRC64;
MNDSTGKKIK MLRRQKKWAQ KDMAGMLDIS VPAYSKIECE ITDINITRLI QVADVLGVEP
CTLLPGHNGD DLLKEENKKL KEKLQYVEKE MMNLQAKLIG MYEAR
//
