ID C7M960_CAPOD Unreviewed; 429 AA.
AC C7M960;
DT 13-OCT-2009, integrated into UniProtKB/TrEMBL.
DT 13-OCT-2009, sequence version 1.
DT 27-MAR-2024, entry version 56.
DE SubName: Full=Integrase family protein {ECO:0000313|EMBL:ACU92406.1};
GN OrderedLocusNames=Coch_0850 {ECO:0000313|EMBL:ACU92406.1};
OS Capnocytophaga ochracea (strain ATCC 27872 / DSM 7271 / JCM 12966 / NCTC
OS 12371 / VPI 2845) (Bacteroides ochraceus).
OC Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales;
OC Flavobacteriaceae; Capnocytophaga.
OX NCBI_TaxID=521097 {ECO:0000313|EMBL:ACU92406.1, ECO:0000313|Proteomes:UP000006650};
RN [1] {ECO:0000313|EMBL:ACU92406.1, ECO:0000313|Proteomes:UP000006650}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 27872 / DSM 7271 / JCM 12966 / VPI 2845
RC {ECO:0000313|Proteomes:UP000006650};
RX PubMed=21304645; DOI=10.4056/sigs.15195;
RA Mavrommatis K., Gronow S., Saunders E., Land M., Lapidus A., Copeland A.,
RA Glavina Del Rio T., Nolan M., Lucas S., Chen F., Tice H., Cheng J.F.,
RA Bruce D., Goodwin L., Pitluck S., Pati A., Ivanova N., Chen A.,
RA Palaniappan K., Chain P., Hauser L., Chang Y.J., Jeffries C.D., Brettin T.,
RA Detter J.C., Han C., Bristow J., Goker M., Rohde M., Eisen J.A.,
RA Markowitz V., Kyrpides N.C., Klenk H.P., Hugenholtz P.;
RT "Complete genome sequence of Capnocytophaga ochracea type strain (VPI
RT 2845).";
RL Stand. Genomic Sci. 1:101-109(2009).
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DR EMBL; CP001632; ACU92406.1; -; Genomic_DNA.
DR RefSeq; WP_015782083.1; NC_013162.1.
DR AlphaFoldDB; C7M960; -.
DR STRING; 521097.Coch_0850; -.
DR GeneID; 29674839; -.
DR KEGG; coc:Coch_0850; -.
DR eggNOG; COG0582; Bacteria.
DR HOGENOM; CLU_033139_7_0_10; -.
DR Proteomes; UP000006650; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR Gene3D; 1.10.150.130; -; 1.
DR Gene3D; 1.10.443.10; Intergrase catalytic core; 1.
DR InterPro; IPR011010; DNA_brk_join_enz.
DR InterPro; IPR013762; Integrase-like_cat_sf.
DR InterPro; IPR002104; Integrase_catalytic.
DR InterPro; IPR010998; Integrase_recombinase_N.
DR InterPro; IPR025269; SAM-like_dom.
DR Pfam; PF13102; Phage_int_SAM_5; 1.
DR Pfam; PF00589; Phage_integrase; 1.
DR SUPFAM; SSF56349; DNA breaking-rejoining enzymes; 1.
DR PROSITE; PS51898; TYR_RECOMBINASE; 1.
PE 4: Predicted;
KW DNA recombination {ECO:0000256|ARBA:ARBA00023172};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000006650}.
FT DOMAIN 225..414
FT /note="Tyr recombinase"
FT /evidence="ECO:0000259|PROSITE:PS51898"
SQ SEQUENCE 429 AA; 49725 MW; E9EDED85426E0B40 CRC64;
MFFYLKEPNG DKDTIIIIQY YIVDEKKLFK YSTGEYVHPN DWDFNARMPK SRKGADGVRL
RKIAAHIMQY NDFLVTLIDN YKLNGEKITR EKLKNAFDAK FKPERVTNGF EYFTDFASDF
VSSIKGTINK NTGKEYSKAR VYIYNQSRNA LINFENYSNK RIKIDEYNAQ LNDEFVAFCM
NEKKYSANTI GELVSGIKVL LRKAKEKGYT IANDLDNFTK TKEESVSVAL SEKEIERLVA
FDFSKDKRLE NTRDLMILGL WTGLRVSDVM ALPAIDPDSK FIEVEPQKTH NTSGAKVVIP
LHHHIKEMIR KRGMPTPLNS VVFNSNIKEV CRLVGFNDIV EGSLMNPKTR RKERGVFEKW
QLISSHTCRR SFATNLYLMN FPTLSIMKIT GHTTEASFLK YIKVTPKEHA EKLLAHWEAY
YKDKEKAPN
//
