ID C8NEZ1_9LACT Unreviewed; 771 AA.
AC C8NEZ1;
DT 03-NOV-2009, integrated into UniProtKB/TrEMBL.
DT 03-NOV-2009, sequence version 1.
DT 24-JAN-2024, entry version 38.
DE RecName: Full=Single-stranded-DNA-specific exonuclease RecJ {ECO:0000256|ARBA:ARBA00019841};
GN Name=recJ {ECO:0000313|EMBL:EEW37700.1};
GN ORFNames=HMPREF0444_0486 {ECO:0000313|EMBL:EEW37700.1};
OS Granulicatella adiacens ATCC 49175.
OC Bacteria; Bacillota; Bacilli; Lactobacillales; Carnobacteriaceae;
OC Granulicatella.
OX NCBI_TaxID=638301 {ECO:0000313|EMBL:EEW37700.1, ECO:0000313|Proteomes:UP000005926};
RN [1] {ECO:0000313|EMBL:EEW37700.1, ECO:0000313|Proteomes:UP000005926}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 49175 {ECO:0000313|EMBL:EEW37700.1,
RC ECO:0000313|Proteomes:UP000005926};
RA Muzny D., Qin X., Deng J., Jiang H., Liu Y., Qu J., Song X.-Z., Zhang L.,
RA Thornton R., Coyle M., Francisco L., Jackson L., Javaid M., Korchina V.,
RA Kovar C., Mata R., Mathew T., Ngo R., Nguyen L., Nguyen N., Okwuonu G.,
RA Ongeri F., Pham C., Simmons D., Wilczek-Boney K., Hale W., Jakkamsetti A.,
RA Pham P., Ruth R., San Lucas F., Warren J., Zhang J., Zhao Z., Zhou C.,
RA Zhu D., Lee S., Bess C., Blankenburg K., Forbes L., Fu Q., Gubbala S.,
RA Hirani K., Jayaseelan J.C., Lara F., Munidasa M., Palculict T., Patil S.,
RA Pu L.-L., Saada N., Tang L., Weissenberger G., Zhu Y., Hemphill L.,
RA Shang Y., Youmans B., Ayvaz T., Ross M., Santibanez J., Aqrawi P.,
RA Gross S., Joshi V., Fowler G., Nazareth L., Reid J., Worley K.,
RA Petrosino J., Highlander S., Gibbs R.;
RL Submitted (AUG-2009) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the RecJ family.
CC {ECO:0000256|ARBA:ARBA00005915}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EEW37700.1}.
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DR EMBL; ACKZ01000012; EEW37700.1; -; Genomic_DNA.
DR RefSeq; WP_005605628.1; NZ_GG694015.1.
DR AlphaFoldDB; C8NEZ1; -.
DR STRING; 638301.HMPREF0444_0486; -.
DR eggNOG; COG0608; Bacteria.
DR HOGENOM; CLU_009736_4_1_9; -.
DR Proteomes; UP000005926; Unassembled WGS sequence.
DR GO; GO:0008409; F:5'-3' exonuclease activity; IEA:InterPro.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0006310; P:DNA recombination; IEA:InterPro.
DR GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR Gene3D; 3.10.310.30; -; 1.
DR Gene3D; 3.90.1640.30; -; 1.
DR InterPro; IPR001667; DDH_dom.
DR InterPro; IPR038763; DHH_sf.
DR InterPro; IPR003156; DHHA1_dom.
DR InterPro; IPR004610; RecJ.
DR InterPro; IPR018779; RecJ_C.
DR InterPro; IPR041122; RecJ_OB.
DR NCBIfam; TIGR00644; recJ; 1.
DR PANTHER; PTHR30255; SINGLE-STRANDED-DNA-SPECIFIC EXONUCLEASE RECJ; 1.
DR PANTHER; PTHR30255:SF2; SINGLE-STRANDED-DNA-SPECIFIC EXONUCLEASE RECJ; 1.
DR Pfam; PF01368; DHH; 1.
DR Pfam; PF02272; DHHA1; 1.
DR Pfam; PF17768; RecJ_OB; 1.
DR Pfam; PF10141; ssDNA-exonuc_C; 1.
DR SUPFAM; SSF64182; DHH phosphoesterases; 1.
PE 3: Inferred from homology;
KW Exonuclease {ECO:0000256|ARBA:ARBA00022839, ECO:0000313|EMBL:EEW37700.1};
KW Hydrolase {ECO:0000313|EMBL:EEW37700.1};
KW Nuclease {ECO:0000256|ARBA:ARBA00022722};
KW Reference proteome {ECO:0000313|Proteomes:UP000005926}.
FT DOMAIN 84..227
FT /note="DDH"
FT /evidence="ECO:0000259|Pfam:PF01368"
FT DOMAIN 318..436
FT /note="DHHA1"
FT /evidence="ECO:0000259|Pfam:PF02272"
FT DOMAIN 453..561
FT /note="RecJ OB"
FT /evidence="ECO:0000259|Pfam:PF17768"
FT DOMAIN 569..768
FT /note="Single-stranded-DNA-specific exonuclease RecJ C-
FT terminal"
FT /evidence="ECO:0000259|Pfam:PF10141"
SQ SEQUENCE 771 AA; 86124 MW; D43D8C0B34B99A2C CRC64;
MSFANYAWKL KENVDEELVT SLSSESGVSR NLVRLCVERG IQTAEELQEF LSPTPHLIHD
PFLLHDMDKA VGRIQEAIEN GELIHIYGDY DADGITSTTI LYETLEMLGA QVSYYLPNRF
TDGYGPNTPA FQRVIEEGHT LIITVDCGIA AHEPIRYAME NGCDVILTDH HEIPSEIPEA
YAVVHPRHPE ANYPCGDLSG AGVAFKLAHA LLGEFPEEMV ELAAIGTIAD LVSLTDENRT
IAKLGIAQMK QTQRIGLVSL LEKLSVKMDK LDEKTIGFQI GPRLNALGRL GDATPGVQLL
TTFDDEEAQS IVDFMQSENE RRQAIVNQIV EEATPIIQEQ MNQPILVLAQ PGWHEGVLGI
VASRIVEQTG KPTLVLGISD DGLTAKGSGR SFGEFNLYDA LTSVKDHLLK FGGHHMAAGL
TVETIMLPTI IDGLEQYAKD HQDLLDAKAT LTIDEVLPLK DITVEWIESL ASLKPFGTDN
PEPIVSLEGI QVASTQLLGA DKKHLKLHLK EDNSTYTLQA MAFSKGEWAA SLQPDTKISI
AGTLEINEWQ NNRLPQLMVK DIAVKGRIVI DWRTSKITKD HLDVENALYL ASNEVYLKEL
QTRIPSNSSV MDFSSFVSSN EIPTANAIVL FDLPEKVEEV ETFFKMEFPQ KLYIIAYTKN
SVVTTGIPDK SKFGSVYKYI QSHGQLPYNE KLVSVANFLK IPVEQFRVIL KVFFELEFVK
IENGYLFIHT NPKTNDLEES VLLKKLKEQL LLEKKFNYSQ FQELKNWIES Q
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