ID C8X4L2_DESRD Unreviewed; 321 AA.
AC C8X4L2;
DT 03-NOV-2009, integrated into UniProtKB/TrEMBL.
DT 03-NOV-2009, sequence version 1.
DT 27-MAR-2024, entry version 64.
DE SubName: Full=MJ0042 family finger-like protein {ECO:0000313|EMBL:ACV69235.1};
GN OrderedLocusNames=Dret_1951 {ECO:0000313|EMBL:ACV69235.1};
OS Desulfohalobium retbaense (strain ATCC 49708 / DSM 5692 / JCM 16813 /
OS HR100).
OC Bacteria; Thermodesulfobacteriota; Desulfovibrionia; Desulfovibrionales;
OC Desulfohalobiaceae; Desulfohalobium.
OX NCBI_TaxID=485915 {ECO:0000313|EMBL:ACV69235.1, ECO:0000313|Proteomes:UP000001052};
RN [1] {ECO:0000313|Proteomes:UP000001052}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 5692 {ECO:0000313|Proteomes:UP000001052};
RG US DOE Joint Genome Institute (JGI-PGF);
RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H.,
RA Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Ivanova N.,
RA Mikhailova N., Munk A.C., Brettin T., Detter J.C., Han C., Tapia R.,
RA Larimer F., Land M., Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P.,
RA Woyke T., Wu D., Spring S., Klenk H.-P., Eisen J.A.;
RT "The complete chromosome of Desulfohalobium retbaense DSM 5692.";
RL Submitted (SEP-2009) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:ACV69235.1, ECO:0000313|Proteomes:UP000001052}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 5692 {ECO:0000313|EMBL:ACV69235.1,
RC ECO:0000313|Proteomes:UP000001052};
RX PubMed=21304676;
RA Spring S., Nolan M., Lapidus A., Glavina Del Rio T., Copeland A., Tice H.,
RA Cheng J.F., Lucas S., Land M., Chen F., Bruce D., Goodwin L., Pitluck S.,
RA Ivanova N., Mavromatis K., Mikhailova N., Pati A., Chen A., Palaniappan K.,
RA Hauser L., Chang Y.J., Jeffries C.D., Munk C., Kiss H., Chain P., Han C.,
RA Brettin T., Detter J.C., Schuler E., Goker M., Rohde M., Bristow J.,
RA Eisen J.A., Markowitz V., Hugenholtz P., Kyrpides N.C., Klenk H.P.;
RT "Complete genome sequence of Desulfohalobium retbaense type strain
RT (HR(100)).";
RL Stand. Genomic Sci. 2:38-48(2010).
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-
CC pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
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DR EMBL; CP001734; ACV69235.1; -; Genomic_DNA.
DR RefSeq; WP_015752378.1; NC_013223.1.
DR AlphaFoldDB; C8X4L2; -.
DR STRING; 485915.Dret_1951; -.
DR KEGG; drt:Dret_1951; -.
DR eggNOG; COG0810; Bacteria.
DR eggNOG; COG2881; Bacteria.
DR HOGENOM; CLU_043379_0_0_7; -.
DR Proteomes; UP000001052; Chromosome.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
DR InterPro; IPR006977; Yip1_dom.
DR InterPro; IPR011723; Znf/thioredoxin_put.
DR NCBIfam; TIGR02098; MJ0042_CXXC; 1.
DR Pfam; PF04893; Yip1; 1.
DR Pfam; PF13717; zinc_ribbon_4; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000001052};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW ECO:0000256|SAM:Phobius}.
FT TRANSMEM 171..191
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 211..239
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 260..285
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 297..317
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 1..36
FT /note="Zinc finger/thioredoxin putative"
FT /evidence="ECO:0000259|Pfam:PF13717"
FT DOMAIN 150..312
FT /note="Yip1"
FT /evidence="ECO:0000259|Pfam:PF04893"
FT REGION 29..101
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 34..52
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 321 AA; 34715 MW; DF833B9E84AFAC0A CRC64;
MEIQCPKCAF VRNVPDTKIP ARARMATCPK CGHKFPFRDL EPSEETVKHT EPDTPSPETQ
APSPENAVPP PSAAETDSQT PEPETAPEPA EQEASEQEAP PREDIWASLE ALNAEPEPDT
DPMPNPEEVP WENLEEHGFF TGLRLTITRA MLSPRRFFSH MPVANGLSMP LVFYLLIAEV
QALAQFFWQL AGIAPQMGQG SQMGVAGVGS ALILIVYPLF LTCILFFVSG INHACLIALR
AGEAGFQGTF RTVAYGSAPF VLAVIPLVGP MLGGVWAMVC TIIGLSCVHR TSLGRVLLAM
FLPFLLLAGL SVVLVVLQSI V
//
