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Database: UniProt
Entry: C9J0X5_HUMAN
LinkDB: C9J0X5_HUMAN
Original site: C9J0X5_HUMAN 
ID   C9J0X5_HUMAN            Unreviewed;       113 AA.
AC   C9J0X5;
DT   03-NOV-2009, integrated into UniProtKB/TrEMBL.
DT   03-NOV-2009, sequence version 1.
DT   08-MAY-2019, entry version 53.
DE   SubName: Full=U4/U6.U5 tri-snRNP-associated protein 2 {ECO:0000313|Ensembl:ENSP00000392911};
DE   Flags: Fragment;
GN   Name=USP39 {ECO:0000313|Ensembl:ENSP00000392911};
OS   Homo sapiens (Human).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
OC   Catarrhini; Hominidae; Homo.
OX   NCBI_TaxID=9606 {ECO:0000313|Ensembl:ENSP00000392911, ECO:0000313|Proteomes:UP000005640};
RN   [1] {ECO:0000313|Ensembl:ENSP00000392911, ECO:0000313|Proteomes:UP000005640}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=15815621; DOI=10.1038/nature03466;
RA   Hillier L.W., Graves T.A., Fulton R.S., Fulton L.A., Pepin K.H.,
RA   Minx P., Wagner-McPherson C., Layman D., Wylie K., Sekhon M.,
RA   Becker M.C., Fewell G.A., Delehaunty K.D., Miner T.L., Nash W.E.,
RA   Kremitzki C., Oddy L., Du H., Sun H., Bradshaw-Cordum H., Ali J.,
RA   Carter J., Cordes M., Harris A., Isak A., van Brunt A., Nguyen C.,
RA   Du F., Courtney L., Kalicki J., Ozersky P., Abbott S., Armstrong J.,
RA   Belter E.A., Caruso L., Cedroni M., Cotton M., Davidson T., Desai A.,
RA   Elliott G., Erb T., Fronick C., Gaige T., Haakenson W., Haglund K.,
RA   Holmes A., Harkins R., Kim K., Kruchowski S.S., Strong C.M.,
RA   Grewal N., Goyea E., Hou S., Levy A., Martinka S., Mead K.,
RA   McLellan M.D., Meyer R., Randall-Maher J., Tomlinson C.,
RA   Dauphin-Kohlberg S., Kozlowicz-Reilly A., Shah N.,
RA   Swearengen-Shahid S., Snider J., Strong J.T., Thompson J., Yoakum M.,
RA   Leonard S., Pearman C., Trani L., Radionenko M., Waligorski J.E.,
RA   Wang C., Rock S.M., Tin-Wollam A.-M., Maupin R., Latreille P.,
RA   Wendl M.C., Yang S.-P., Pohl C., Wallis J.W., Spieth J., Bieri T.A.,
RA   Berkowicz N., Nelson J.O., Osborne J., Ding L., Meyer R., Sabo A.,
RA   Shotland Y., Sinha P., Wohldmann P.E., Cook L.L., Hickenbotham M.T.,
RA   Eldred J., Williams D., Jones T.A., She X., Ciccarelli F.D.,
RA   Izaurralde E., Taylor J., Schmutz J., Myers R.M., Cox D.R., Huang X.,
RA   McPherson J.D., Mardis E.R., Clifton S.W., Warren W.C.,
RA   Chinwalla A.T., Eddy S.R., Marra M.A., Ovcharenko I., Furey T.S.,
RA   Miller W., Eichler E.E., Bork P., Suyama M., Torrents D.,
RA   Waterston R.H., Wilson R.K.;
RT   "Generation and annotation of the DNA sequences of human chromosomes 2
RT   and 4.";
RL   Nature 434:724-731(2005).
RN   [2] {ECO:0000313|Ensembl:ENSP00000392911}
RP   IDENTIFICATION.
RG   Ensembl;
RL   Submitted (JUL-2011) to UniProtKB.
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DR   EMBL; AC012454; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; AC016753; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   jPOST; C9J0X5; -.
DR   MaxQB; C9J0X5; -.
DR   PeptideAtlas; C9J0X5; -.
DR   PRIDE; C9J0X5; -.
DR   Ensembl; ENST00000442708; ENSP00000392911; ENSG00000168883.
DR   UCSC; uc061lip.1; human.
DR   HGNC; HGNC:20071; USP39.
DR   OpenTargets; ENSG00000168883; -.
DR   GeneTree; ENSGT00390000007992; -.
DR   ChiTaRS; USP39; human.
DR   Proteomes; UP000005640; Chromosome 2.
DR   Bgee; ENSG00000168883; Expressed in 212 organ(s), highest expression level in gastrocnemius.
DR   ExpressionAtlas; C9J0X5; baseline and differential.
DR   GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR   GO; GO:0000245; P:spliceosomal complex assembly; IEA:InterPro.
DR   Gene3D; 3.30.40.10; -; 1.
DR   InterPro; IPR033809; USP39.
DR   InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR   InterPro; IPR001607; Znf_UBP.
DR   PANTHER; PTHR21646:SF16; PTHR21646:SF16; 1.
DR   Pfam; PF02148; zf-UBP; 1.
DR   PROSITE; PS50271; ZF_UBP; 1.
PE   1: Evidence at protein level;
KW   Complete proteome {ECO:0000313|Proteomes:UP000005640};
KW   Proteomics identification {ECO:0000213|EPD:C9J0X5,
KW   ECO:0000213|MaxQB:C9J0X5, ECO:0000213|PeptideAtlas:C9J0X5};
KW   Reference proteome {ECO:0000313|Proteomes:UP000005640}.
FT   DOMAIN       15     80       UBP-type. {ECO:0000259|PROSITE:PS50271}.
FT   ZN_FING      15     80       UBP-type. {ECO:0000256|PROSITE-ProRule:
FT                                PRU00502}.
FT   NON_TER     113    113       {ECO:0000313|Ensembl:ENSP00000392911}.
SQ   SEQUENCE   113 AA;  13016 MW;  F9AB69BDD9F1274B CRC64;
     MLTAVPSHLF SAKNGRVDSE DRRSRHCPYL DTINSFSPFP TGRGLKSHAY IHSVQFSHHV
     FLNLHTLKFY CLPDNYEIID SSLEDITYVL KPTFTKQQIA NLDKQAKLSR AYD
//
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